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A comprehensive neural simulation of slow-wave sleep and highly responsive wakefulness dynamics

View ORCID ProfileJennifer S. Goldman, Lionel Kusch, Bahar Hazal Yalçinkaya, Damien Depannemaecker, View ORCID ProfileTrang-Anh E. Nghiem, Viktor Jirsa, View ORCID ProfileAlain Destexhe
doi: https://doi.org/10.1101/2021.08.31.458365
Jennifer S. Goldman
1Paris Saclay University, Institute of Neuroscience, CNRS, Gif-sur-Yvette, France
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  • For correspondence: Alain.DESTEXHE@cnrs.fr Jennifer.goldman@mail.mcgill.ca
Lionel Kusch
2Institut de Neurosciences des Systémes, Aix-Marseille University, INSERM, Marseille, France
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Bahar Hazal Yalçinkaya
1Paris Saclay University, Institute of Neuroscience, CNRS, Gif-sur-Yvette, France
2Institut de Neurosciences des Systémes, Aix-Marseille University, INSERM, Marseille, France
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Damien Depannemaecker
1Paris Saclay University, Institute of Neuroscience, CNRS, Gif-sur-Yvette, France
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Trang-Anh E. Nghiem
1Paris Saclay University, Institute of Neuroscience, CNRS, Gif-sur-Yvette, France
3Laboratoire de Physique de l’Ecole Normale Supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université de Paris, Paris
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Viktor Jirsa
2Institut de Neurosciences des Systémes, Aix-Marseille University, INSERM, Marseille, France
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Alain Destexhe
1Paris Saclay University, Institute of Neuroscience, CNRS, Gif-sur-Yvette, France
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  • ORCID record for Alain Destexhe
  • For correspondence: Alain.DESTEXHE@cnrs.fr Jennifer.goldman@mail.mcgill.ca
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ABSTRACT

Hallmarks of neural dynamics during healthy human brain states span spatial scales from neuromodulators acting on microscopic ion channels to macroscopic changes in communication between brain regions. Developing a scale-integrated understanding of neural dynamics has therefore remained challenging. Here, we perform the integration across scales using mean-field modeling of Adaptive Exponential (AdEx) neurons, explicitly incorporating intrinsic properties of excitatory and inhibitory neurons. We report that when AdEx mean-field neural populations are connected via structural tracts defined by the human connectome, macroscopic dynamics resembling human brain activity emerge. Importantly, the model can qualitatively and quantitatively account for properties of empirical spontaneous and stimulus-evoked dynamics in the space, time, phase, and frequency domains. Remarkably, the model also reproduces brain-wide enhanced responsiveness and capacity to encode information particularly during wake-like states, as quantified using the perturbational complexity index. The model was run using The Virtual Brain (TVB) simulator, and is open-access in EBRAINS. This approach not only provides a scale-integrated understanding of brain states and their underlying mechanisms, but also open access tools to investigate brain responsiveness, toward producing a more unified, formal understanding of experimental data from conscious and unconscious states, as well as their associated pathologies.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://gitlab.ebrains.eu/kancourt/tvb-adex-showcase3-git

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted September 01, 2021.
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A comprehensive neural simulation of slow-wave sleep and highly responsive wakefulness dynamics
Jennifer S. Goldman, Lionel Kusch, Bahar Hazal Yalçinkaya, Damien Depannemaecker, Trang-Anh E. Nghiem, Viktor Jirsa, Alain Destexhe
bioRxiv 2021.08.31.458365; doi: https://doi.org/10.1101/2021.08.31.458365
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A comprehensive neural simulation of slow-wave sleep and highly responsive wakefulness dynamics
Jennifer S. Goldman, Lionel Kusch, Bahar Hazal Yalçinkaya, Damien Depannemaecker, Trang-Anh E. Nghiem, Viktor Jirsa, Alain Destexhe
bioRxiv 2021.08.31.458365; doi: https://doi.org/10.1101/2021.08.31.458365

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