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Molecular basis of differential adventitious rooting competence in poplar genotypes

Alok Ranjan, View ORCID ProfileIrene Perrone, View ORCID ProfileSanaria Alallaq, Rajesh Singh, Adeline Rigal, View ORCID ProfileFederica Brunoni, View ORCID ProfileWalter Chitarra, Frederic Guinet, View ORCID ProfileAnnegret Kohler, View ORCID ProfileFrancis Martin, View ORCID ProfileNathaniel Street, View ORCID ProfileRishikesh Bhalerao, View ORCID ProfileValérie Legué, View ORCID ProfileCatherine Bellini
doi: https://doi.org/10.1101/2021.09.14.460203
Alok Ranjan
1Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden
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Irene Perrone
1Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden
2Institute for Sustainable Plant Protection, National Research Council of Italy (IPSP-CNR), I-10135 Torino, Italy
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  • ORCID record for Irene Perrone
Sanaria Alallaq
1Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden
3Department of Biology, College of Science for Women, Baghdad University, 10071, Baghdad, Iraq
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Rajesh Singh
4Umeå Plant Science Centre, Department of Forest Genetics and Physiology, Swedish Agriculture University, SE-90183 Umea, Sweden
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Adeline Rigal
5Université de Lorraine, INRAE, UMR Interactions Arbres/Microorganismes, Laboratory of Excellence ARBRE, INRAE GrandEst-Nancy, Champenoux, 54280 France
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Federica Brunoni
1Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden
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Walter Chitarra
2Institute for Sustainable Plant Protection, National Research Council of Italy (IPSP-CNR), I-10135 Torino, Italy
6Research Centre for Viticulture and Enology, Council for Agricultural Research and Economics (CREA-VE), I-31015 Conegliano (TV), Italy
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Frederic Guinet
5Université de Lorraine, INRAE, UMR Interactions Arbres/Microorganismes, Laboratory of Excellence ARBRE, INRAE GrandEst-Nancy, Champenoux, 54280 France
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Annegret Kohler
5Université de Lorraine, INRAE, UMR Interactions Arbres/Microorganismes, Laboratory of Excellence ARBRE, INRAE GrandEst-Nancy, Champenoux, 54280 France
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Francis Martin
5Université de Lorraine, INRAE, UMR Interactions Arbres/Microorganismes, Laboratory of Excellence ARBRE, INRAE GrandEst-Nancy, Champenoux, 54280 France
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Nathaniel Street
1Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden
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Rishikesh Bhalerao
4Umeå Plant Science Centre, Department of Forest Genetics and Physiology, Swedish Agriculture University, SE-90183 Umea, Sweden
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Valérie Legué
5Université de Lorraine, INRAE, UMR Interactions Arbres/Microorganismes, Laboratory of Excellence ARBRE, INRAE GrandEst-Nancy, Champenoux, 54280 France
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Catherine Bellini
1Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-90736 Umeå, Sweden
7Institut Jean-Pierre Bourgin, INRAE, AgroParisTech, Université Paris-Saclay, FR-78000 Versailles, France
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  • For correspondence: catherine.bellini@umu.se
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Abstract

  • Recalcitrant adventitious root (AR) development is a major hurdle in propagating commercially important woody plants. Although significant progress has been made to identify genes involved in subsequent steps of AR development, the molecular basis of differences in apparent recalcitrance to form AR between easy-to-root and difficult-to-root genotypes remains unknown.

  • To address this, we generated cambium tissue-specific transcriptomic data from stem cuttings of hybrid aspen, T89 (difficult-to-root) and hybrid poplar OP42 (easy-to-root) and used transgenic approaches to verify the role of several transcription factors (TF) in the control of adventitious rooting.

  • Increased peroxidase activity is positively correlated with better rooting. We found differentially expressed genes encoding Reactive Oxygen Species (ROS) scavenging proteins to be enriched in OP42 compared to T89. A higher number of differentially expressed TF in OP42 compared to T89 cambium cells was revealed by a more intense transcriptional reprograming in the former. PtMYC2, a potential negative regulator, was less expressed in OP42 compared to T89. Using transgenic approaches, we have demonstrated that PttARF17.1 and PttMYC2.1 negatively regulate adventitious rooting.

  • Our results provide insights into the molecular basis of genotypic differences in AR and implicate differential expression of the master regulator MYC2 as a critical player in this process.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted September 14, 2021.
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Molecular basis of differential adventitious rooting competence in poplar genotypes
Alok Ranjan, Irene Perrone, Sanaria Alallaq, Rajesh Singh, Adeline Rigal, Federica Brunoni, Walter Chitarra, Frederic Guinet, Annegret Kohler, Francis Martin, Nathaniel Street, Rishikesh Bhalerao, Valérie Legué, Catherine Bellini
bioRxiv 2021.09.14.460203; doi: https://doi.org/10.1101/2021.09.14.460203
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Molecular basis of differential adventitious rooting competence in poplar genotypes
Alok Ranjan, Irene Perrone, Sanaria Alallaq, Rajesh Singh, Adeline Rigal, Federica Brunoni, Walter Chitarra, Frederic Guinet, Annegret Kohler, Francis Martin, Nathaniel Street, Rishikesh Bhalerao, Valérie Legué, Catherine Bellini
bioRxiv 2021.09.14.460203; doi: https://doi.org/10.1101/2021.09.14.460203

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