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Efficient targeted transgenesis of large donor DNA into multiple mouse genetic backgrounds using bacteriophage Bxb1 integrase

Benjamin E. Low, Vishnu Hosur, Simon Lesbirel, Michael V. Wiles
doi: https://doi.org/10.1101/2021.09.20.461117
Benjamin E. Low
The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609 USA
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Vishnu Hosur
The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609 USA
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  • For correspondence: vishnu.hosur@jax.org Michael.Wiles@jax.org
Simon Lesbirel
The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609 USA
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Michael V. Wiles
The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609 USA
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  • For correspondence: vishnu.hosur@jax.org Michael.Wiles@jax.org
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Abstract

Efficient, targeted integration of large DNA constructs represent a significant hurdle in genetic engineering for the development of mouse models of human disease and synthetic biology research. To address this, we developed a system for efficient and precise, targeted single-copy integration of large transgenes directly into the zygote using multiple mouse genetic backgrounds. Conventional approaches, such as random transgenesis, CRISPR/Cas9-mediated homology-directed repair (HDR), lentivirus-based insertion, or DNA transposases all have significant limitations. Our strategy uses in vivo Bxb1 mediated recombinase-mediated cassette exchange (RMCE) to efficiently generate precise single-copy integrations of transgenes. This is achieved using a transgene “landing pad” composed of dual heterologous Bxb1 attachment (att) sites in cis, pre-positioned in the Gt(ROSA)26Sor safe harbor locus. Successful RMCE is achieved in att carrier zygotes using donor DNA carrying cognate attachment sites flanking the desired donor transgene microinjected along with Bxb1-integrase mRNA. This approach routinely achieves perfect vector-free integration of donor constructs at efficiencies as high as 43% and has generated transgenic animals containing inserts up to ∼43kb. Furthermore, when coupled with a nanopore-based Cas9-targeted sequencing (nCATS) approach, complete verification of the precise insertion sequence can be achieved. As a proof-of-concept we describe the creation and characterization of C57BL/6J and NSG Krt18-ACE2 transgenic mouse models for SARS-CoV2 research with verified heterozygous N1 animals available for experimental use in ∼4 months. In addition, we created a diverse series of mouse backgrounds carrying a single att site version of the landing pad allele in C57BL/6J, NSG, B6(Cg)-Tyrc-2J/J, FVB/NJ, PWK/PhJ, 129S1/SvImJ, A/J, NOD/ShiLtJ, NZO/HILtJ, CAST/EiJ, and DBA/2J for rapid transgene insertion. Combined, this system enables predictable, rapid creation of precisely targeted transgenic animals across multiple genetic backgrounds, simplifying characterization, speeding expansion and use.

Competing Interest Statement

This work is the subject of a patent filing by The Jackson Laboratory, with inventorship listed as MVW and BEL.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted September 20, 2021.
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Efficient targeted transgenesis of large donor DNA into multiple mouse genetic backgrounds using bacteriophage Bxb1 integrase
Benjamin E. Low, Vishnu Hosur, Simon Lesbirel, Michael V. Wiles
bioRxiv 2021.09.20.461117; doi: https://doi.org/10.1101/2021.09.20.461117
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Efficient targeted transgenesis of large donor DNA into multiple mouse genetic backgrounds using bacteriophage Bxb1 integrase
Benjamin E. Low, Vishnu Hosur, Simon Lesbirel, Michael V. Wiles
bioRxiv 2021.09.20.461117; doi: https://doi.org/10.1101/2021.09.20.461117

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