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Stress-dependent dynamic and reversible formation of cytoskeleton-like filaments and gel-transition by tardigrade tolerance proteins

View ORCID ProfileAkihiro Tanaka, Tomomi Nakano, View ORCID ProfileKento Watanabe, Kazutoshi Masuda, View ORCID ProfileShuichi Kamata, View ORCID ProfileReitaro Yasui, View ORCID ProfileHiroko Kozuka-Hata, Chiho Watanabe, View ORCID ProfileTakumi Chinen, View ORCID ProfileDaiju Kitagawa, View ORCID ProfileMasaaki Oyama, View ORCID ProfileMiho Yanagisawa, View ORCID ProfileTakekazu Kunieda
doi: https://doi.org/10.1101/2021.10.02.462891
Akihiro Tanaka
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
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Tomomi Nakano
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
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Kento Watanabe
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
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  • ORCID record for Kento Watanabe
Kazutoshi Masuda
2Komaba Institute for Science, Graduate School of Arts and Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan
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Shuichi Kamata
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
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Reitaro Yasui
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
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Hiroko Kozuka-Hata
3Medical Proteomics Laboratory, The Institute of Medical Science, The University of Tokyo, Minato-ku, Tokyo, Japan
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  • ORCID record for Hiroko Kozuka-Hata
Chiho Watanabe
2Komaba Institute for Science, Graduate School of Arts and Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan
#aGraduate School of Integrated Sciences for Life, School of Integrated Arts and Sciences, Hiroshima University, Higashi-Hiroshima, Hiroshima, Japan
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Takumi Chinen
4Department of Physiological Chemistry, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
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  • ORCID record for Takumi Chinen
Daiju Kitagawa
4Department of Physiological Chemistry, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
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Masaaki Oyama
3Medical Proteomics Laboratory, The Institute of Medical Science, The University of Tokyo, Minato-ku, Tokyo, Japan
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  • ORCID record for Masaaki Oyama
Miho Yanagisawa
2Komaba Institute for Science, Graduate School of Arts and Sciences, The University of Tokyo, Meguro-ku, Tokyo, Japan
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Takekazu Kunieda
1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
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  • ORCID record for Takekazu Kunieda
  • For correspondence: kunieda@bs.s.u-tokyo.ac.jp
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Abstract

Tardigrades are able to tolerate almost complete dehydration by entering a reversible ametabolic state called anhydrobiosis and resume their animation upon rehydration. Dehydrated tardigrades are exceptionally stable and withstand various physical extremes. Although trehalose and late embryogenesis abundant (LEA) proteins have been extensively studied as potent protectants against dehydration in other anhydrobiotic organisms, tardigrades produce high amounts of tardigrade-unique protective cytoplasmic-abundant heat-soluble (CAHS) proteins which are essential for the anhydrobiotic survival of tardigrades. However, the precise mechanisms of their action in this protective role are not fully understood. In the present study, we first postulated the presence of tolerance proteins that form protective condensates via phase separation in a stress-dependent manner and searched for tardigrade proteins that reversibly form condensates upon dehydration-like stress. Through comprehensive analysis, we identified 336 such proteins, collectively dubbed “dehydration-induced reversibly condensing proteins (DRPs)”. Unexpectedly, we rediscovered CAHS proteins as highly enriched in DRPs, 3 of which were major components of DRPs. We revealed that these CAHS proteins reversibly polymerize into many cytoskeleton-like filaments depending on hyperosmotic stress in cultured cells and undergo reversible gel-transition in vitro, which increases the mechanical strength of cell-like microdroplets. The conserved putative helical C-terminal region is necessary and sufficient for filament formation by CAHS proteins, and mutations disrupting the secondary structure of this region impaired both the filament formation and the gel transition. On the basis of these results, we propose that CAHS proteins are novel cytoskeletal proteins that form filamentous networks and undergo gel-transition in a stress-dependent manner to provide on-demand physical stabilization of cell integrity against deformative forces during dehydration and contribute to the exceptional stability of dehydrated tardigrades.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted October 03, 2021.
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Stress-dependent dynamic and reversible formation of cytoskeleton-like filaments and gel-transition by tardigrade tolerance proteins
Akihiro Tanaka, Tomomi Nakano, Kento Watanabe, Kazutoshi Masuda, Shuichi Kamata, Reitaro Yasui, Hiroko Kozuka-Hata, Chiho Watanabe, Takumi Chinen, Daiju Kitagawa, Masaaki Oyama, Miho Yanagisawa, Takekazu Kunieda
bioRxiv 2021.10.02.462891; doi: https://doi.org/10.1101/2021.10.02.462891
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Stress-dependent dynamic and reversible formation of cytoskeleton-like filaments and gel-transition by tardigrade tolerance proteins
Akihiro Tanaka, Tomomi Nakano, Kento Watanabe, Kazutoshi Masuda, Shuichi Kamata, Reitaro Yasui, Hiroko Kozuka-Hata, Chiho Watanabe, Takumi Chinen, Daiju Kitagawa, Masaaki Oyama, Miho Yanagisawa, Takekazu Kunieda
bioRxiv 2021.10.02.462891; doi: https://doi.org/10.1101/2021.10.02.462891

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