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High-throughput phenotypic screen identifies a new family of potent anti-amoebic compounds

View ORCID ProfileConall Sauvey, View ORCID ProfileGretchen Ehrenkaufer, Jonathan Blevitt, Paul Jackson, Ruben Abagyan
doi: https://doi.org/10.1101/2021.10.06.463301
Conall Sauvey
1Center for Discovery and Innovation in Parasitic Diseases, Skaggs School for Pharmacy and Pharmaceutical Sciences, University of California—San Diego, La Jolla, California, United States of America
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Gretchen Ehrenkaufer
2Division of Infectious Diseases, Department of Internal Medicine, Stanford University School of Medicine, Stanford, California, United States of America
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Jonathan Blevitt
3Janssen Research and Development, LLC, Ja Jolla, California, United States of America
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Paul Jackson
3Janssen Research and Development, LLC, Ja Jolla, California, United States of America
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Ruben Abagyan
1Center for Discovery and Innovation in Parasitic Diseases, Skaggs School for Pharmacy and Pharmaceutical Sciences, University of California—San Diego, La Jolla, California, United States of America
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  • For correspondence: rabagyan@health.ucsd.edu
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Abstract

Entamoeba histolytica is a disease-causing parasitic amoeba which affects an estimated 50 million people worldwide, particularly in socioeconomically vulnerable populations experiencing water sanitation issues. Infection with E. histolytica is referred to as amoebiasis, and can cause symptoms such as colitis, dysentery, and even death in extreme cases. Drugs exist that are capable of killing this parasite, but they are hampered by downsides such as significant adverse effects at therapeutic concentrations, issues with patient compliance, the need for additional drugs to kill the transmissible cyst stage, and potential development of resistance. Past screens of small and medium sized chemical libraries have yielded anti-amoebic candidates, thus rendering high-throughput screening a promising direction for new drug discovery in this area. In this study, we screened a curated 80,000-compound library from Janssen pharmaceuticals against E. histolytica trophozoites in vitro, and from it identified a highly potent new inhibitor compound. Further experimentation confirmed the activity of this compound, as well as that of several structurally related compounds, originating from both the Janssen Jump-stARter library, and from chemical vendors, thus highlighting a new structure-activity relationship (SAR). In addition, we confirmed that the compound inhibited E. histolytica survival as rapidly as the current standard of care and inhibited transmissible cysts of the related model organism Entamoeba invadens. Together these results constitute the discovery of a novel class of chemicals with favorable in vitro pharmacological properties which may lead to an improved therapy against this parasite and in all of its life stages.

Author summary The parasite Entamoeba histolytica represents a significant challenge in the field of global health. It currently infects and causes disease among millions of people worldwide, particularly those lacking access to clean water. Drugs exist to treat this disease, but nevertheless it persists as a problem, likely at least partly due to problems and downsides inherent to these drugs. Hence the search for new and better ones is needed. We report here our contribution to this search, consisting of testing a large, carefully-curated collection of tens of thousands of chemicals for their ability to kill E. histolytica. This large-scale test resulted in the identification of one of the compounds as potently anti-amoebic, capable of killing the parasite cells at extremely low concentrations. Further experimentation found several chemically-related compounds to also possess this property, and additionally found the first compound capable of killing the infective life stage of another Entamoeba parasite. These results have revealed an entire new family of chemicals with good potential for development as better drugs against this disease.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted October 07, 2021.
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High-throughput phenotypic screen identifies a new family of potent anti-amoebic compounds
Conall Sauvey, Gretchen Ehrenkaufer, Jonathan Blevitt, Paul Jackson, Ruben Abagyan
bioRxiv 2021.10.06.463301; doi: https://doi.org/10.1101/2021.10.06.463301
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High-throughput phenotypic screen identifies a new family of potent anti-amoebic compounds
Conall Sauvey, Gretchen Ehrenkaufer, Jonathan Blevitt, Paul Jackson, Ruben Abagyan
bioRxiv 2021.10.06.463301; doi: https://doi.org/10.1101/2021.10.06.463301

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