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Structure of the stress-related LHCSR1 complex determined by an integrated computational strategy

Ingrid Guarnetti Prandi, View ORCID ProfileVladislav Sláma, Cristina Pecorilla, View ORCID ProfileLorenzo Cupellini, View ORCID ProfileBenedetta Mennucci
doi: https://doi.org/10.1101/2021.10.06.463383
Ingrid Guarnetti Prandi
1Department of Chemistry and Industrial Chemistry, University of Pisa, 56124 Pisa, Italy
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Vladislav Sláma
1Department of Chemistry and Industrial Chemistry, University of Pisa, 56124 Pisa, Italy
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Cristina Pecorilla
1Department of Chemistry and Industrial Chemistry, University of Pisa, 56124 Pisa, Italy
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Lorenzo Cupellini
1Department of Chemistry and Industrial Chemistry, University of Pisa, 56124 Pisa, Italy
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  • For correspondence: lorenzo.cupellini@unipi.it benedetta.mennucci@unipi.it
Benedetta Mennucci
1Department of Chemistry and Industrial Chemistry, University of Pisa, 56124 Pisa, Italy
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  • ORCID record for Benedetta Mennucci
  • For correspondence: lorenzo.cupellini@unipi.it benedetta.mennucci@unipi.it
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Abstract

Light-harvesting complexes (LHCs) are pigment-protein complexes whose main function is to capture sunlight and transfer the energy to reaction centers of photosystems. In response to varying light conditions, LH complexes also play photoregulation and photoprotection roles. In algae and mosses, a sub-family of LHCs, Light-Harvesting complex stress related (LHCSR), is responsible for photoprotective quenching. Despite their functional and evolutionary importance, no direct structural information on LHCSRs is available that can explain their unique properties. In this work we propose a structural model of LHCSR1 from the moss P. Patens, obtained through an integrated computational strategy that combines homology modeling, molecular dynamics, and multiscale quantum chemical calculations. The model is validated by reproducing the spectral properties of LHCSR1. Our model reveals the structural specificity of LHCSR1, as compared with the CP29 LH complex, and poses the basis for understanding photoprotective quenching in mosses.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted October 07, 2021.
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Structure of the stress-related LHCSR1 complex determined by an integrated computational strategy
Ingrid Guarnetti Prandi, Vladislav Sláma, Cristina Pecorilla, Lorenzo Cupellini, Benedetta Mennucci
bioRxiv 2021.10.06.463383; doi: https://doi.org/10.1101/2021.10.06.463383
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Structure of the stress-related LHCSR1 complex determined by an integrated computational strategy
Ingrid Guarnetti Prandi, Vladislav Sláma, Cristina Pecorilla, Lorenzo Cupellini, Benedetta Mennucci
bioRxiv 2021.10.06.463383; doi: https://doi.org/10.1101/2021.10.06.463383

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