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The initiation of the wound healing program is regulated by the convergence of mechanical and epigenetic cues

View ORCID ProfileTanay Bhatt, Rakesh Dey, Akshay M. Hegde, Alhad Ashok Ketkar, Ajai J. Pulianmackal, Ashim P. Deb, Shravanti Rampalli, Colin Jamora
doi: https://doi.org/10.1101/2021.10.09.463764
Tanay Bhatt
1IFOM-inStem Joint Research Laboratory, Center for Inflammation and Tissue Homeostasis, Institute for Stem Cell Science and Regenerative Medicine, Bangalore
2National Centre for Biological Sciences, Bangalore
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  • ORCID record for Tanay Bhatt
Rakesh Dey
1IFOM-inStem Joint Research Laboratory, Center for Inflammation and Tissue Homeostasis, Institute for Stem Cell Science and Regenerative Medicine, Bangalore
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Akshay M. Hegde
1IFOM-inStem Joint Research Laboratory, Center for Inflammation and Tissue Homeostasis, Institute for Stem Cell Science and Regenerative Medicine, Bangalore
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Alhad Ashok Ketkar
3Center for Inflammation and Tissue Homeostasis, Institute for Stem Cell Science and Regenerative Medicine, Bangalore
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Ajai J. Pulianmackal
1IFOM-inStem Joint Research Laboratory, Center for Inflammation and Tissue Homeostasis, Institute for Stem Cell Science and Regenerative Medicine, Bangalore
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Ashim P. Deb
1IFOM-inStem Joint Research Laboratory, Center for Inflammation and Tissue Homeostasis, Institute for Stem Cell Science and Regenerative Medicine, Bangalore
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Shravanti Rampalli
3Center for Inflammation and Tissue Homeostasis, Institute for Stem Cell Science and Regenerative Medicine, Bangalore
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Colin Jamora
1IFOM-inStem Joint Research Laboratory, Center for Inflammation and Tissue Homeostasis, Institute for Stem Cell Science and Regenerative Medicine, Bangalore
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  • For correspondence: colinj@instem.res.in
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ABSTRACT

Wound healing in the skin is a complex physiological process that is a product of a cell state transition from homeostasis to repair. Mechanical cues are increasingly being recognized as important regulators of cellular reprogramming, but the mechanism by which it is translated to changes in gene expression and ultimately cellular behavior remains largely a mystery. To probe the molecular underpinnings of this phenomenon further, we used the downregulation of caspase-8 as a biomarker of a cell entering the wound-healing program. We found that the wound-induced release of tension within the epidermis leads to the alteration of gene expression via the nuclear translocation of the DNA methyltransferase 3A (DNMT3a). This enzyme then methylates promoters of genes that are known to be downregulated in response to wound stimuli as well as potentially novel players in the repair program. Overall, these findings illuminate the convergence of mechanical and epigenetic signaling modules that are important regulators of the transcriptome landscape required to initiate the tissue repair process in the differentiated layers of the epidermis.

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Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • A summary figure is added below the abstract, line numbers are added, figure 5D small correction

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted October 22, 2021.
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The initiation of the wound healing program is regulated by the convergence of mechanical and epigenetic cues
Tanay Bhatt, Rakesh Dey, Akshay M. Hegde, Alhad Ashok Ketkar, Ajai J. Pulianmackal, Ashim P. Deb, Shravanti Rampalli, Colin Jamora
bioRxiv 2021.10.09.463764; doi: https://doi.org/10.1101/2021.10.09.463764
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The initiation of the wound healing program is regulated by the convergence of mechanical and epigenetic cues
Tanay Bhatt, Rakesh Dey, Akshay M. Hegde, Alhad Ashok Ketkar, Ajai J. Pulianmackal, Ashim P. Deb, Shravanti Rampalli, Colin Jamora
bioRxiv 2021.10.09.463764; doi: https://doi.org/10.1101/2021.10.09.463764

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