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Oncogenic KRAS Requires Complete Loss of BAP1 Function for Development of Murine Intrahepatic Cholangiocarcinoma

View ORCID ProfileRebecca Marcus, View ORCID ProfileSammy Ferri-Borgogno, View ORCID ProfileAbdel Hosein, Wai Chin Foo, Bidyut Ghosh, Jun Zhao, Kimal Rajapakshe, View ORCID ProfileJames Brugarolas, Anirban Maitra, Sonal Gupta
doi: https://doi.org/10.1101/2021.10.12.464103
Rebecca Marcus
1Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
2Department of Surgical Oncology, Providence Saint John’s Cancer Institute, Santa Monica, CA
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  • For correspondence: rebecca.marcus@providence.org
Sammy Ferri-Borgogno
1Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
3Department of Gynecologic Oncology and Reproductive Medicine, University of Texas MD Anderson Cancer Center, Houston, TX
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Abdel Hosein
1Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
4Advocate Aurora Health, Vince Lombardi Cancer Clinic, Sheboygan, WI
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Wai Chin Foo
5Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
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Bidyut Ghosh
1Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
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Jun Zhao
1Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
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Kimal Rajapakshe
1Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
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James Brugarolas
6Kidney Cancer Program, Department of Internal Medicine, Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, TX
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Anirban Maitra
1Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
7Sheikh Ahmed Center for Pancreatic Cancer Research, University of Texas MD Anderson Cancer Center, Houston, TX
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Sonal Gupta
1Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX
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Abstract

Intrahepatic cholangiocarcinoma (ICC) is a primary biliary malignancy that harbors a dismal prognosis. Oncogenic mutations of KRAS and loss of function mutations of BRCA1-associated protein 1 (BAP1) have been identified as recurrent somatic alterations in ICC. However, an autochthonous genetically engineered mouse model of ICC that genocopies the co-occurrence of these mutations has never been developed. By crossing Albumin-Cre mice bearing conditional alleles of mutant Kras and/or floxed Bap1, Cre-mediated recombination within the liver was induced. Mice with hepatic expression of mutant KrasG12D alone (KA), bi-allelic loss of hepatic Bap1 (BhomoA), and heterozygous loss of Bap1 in conjunction with mutant KrasG12D expression (BhetKA) developed primary hepatocellular carcinoma (HCC), but no discernible ICC. In contrast, mice with homozygous loss of Bap1 in conjunction with mutant KrasG12D expression (BhomoKA) developed discrete foci of HCC and ICC. Further, the median survival of BhomoKA mice was significantly shorter at 24 weeks, when compared to median survival of ≥40 weeks in BhetKA mice and approximately 50 weeks in BhomoA and KA mice (p <0.001). Microarray analysis performed on liver tissue from KA and BhomoKA mice identified differentially expressed genes in the setting of BAP1 loss and suggests that deregulation of ferroptosis might be one mechanism by which loss of BAP1 cooperates with oncogenic Ras in hepato-biliary carcinogenesis. Our autochthonous model provides an in vivo platform to further study this lethal class of neoplasm.

Competing Interest Statement

A.M. receives royalties for a pancreatic cancer biomarker test from Cosmos Wisdom Biotechnol-ogy, and on a patent that has been licensed by Johns Hopkins University to ThriveEarlier Detec-tion. A.M. also serves as a consultant for Freenome. The remaining authors declare no conflict of interest.

Footnotes

  • https://urldefense.com/v3/__https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE183554__;!!PfbeBCCAmug!yxRfs7maVWvBKsufS2dLRYJ49lon75ndjapD679Ra3fpYnvFB_QvHvgKmgX6AkOQL3vNCQ$

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted October 13, 2021.
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Oncogenic KRAS Requires Complete Loss of BAP1 Function for Development of Murine Intrahepatic Cholangiocarcinoma
Rebecca Marcus, Sammy Ferri-Borgogno, Abdel Hosein, Wai Chin Foo, Bidyut Ghosh, Jun Zhao, Kimal Rajapakshe, James Brugarolas, Anirban Maitra, Sonal Gupta
bioRxiv 2021.10.12.464103; doi: https://doi.org/10.1101/2021.10.12.464103
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Oncogenic KRAS Requires Complete Loss of BAP1 Function for Development of Murine Intrahepatic Cholangiocarcinoma
Rebecca Marcus, Sammy Ferri-Borgogno, Abdel Hosein, Wai Chin Foo, Bidyut Ghosh, Jun Zhao, Kimal Rajapakshe, James Brugarolas, Anirban Maitra, Sonal Gupta
bioRxiv 2021.10.12.464103; doi: https://doi.org/10.1101/2021.10.12.464103

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