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SARS-CoV-2 spike protein induces abnormal inflammatory blood clots neutralized by fibrin immunotherapy

Jae Kyu Ryu, Elif G. Sozmen, Karuna Dixit, Mauricio Montano, Yusuke Matsui, Yixin Liu, Ekram Helmy, Thomas J. Deerinck, Zhaoqi Yan, Renaud Schuck, Rosa Meza Acevedo, Collin M. Spencer, Reuben Thomas, View ORCID ProfileAlexander R. Pico, Scott S. Zamvil, Kara L. Lynch, Mark H. Ellisman, Warner C. Greene, Katerina Akassoglou
doi: https://doi.org/10.1101/2021.10.12.464152
Jae Kyu Ryu
1Gladstone Institutes; San Francisco, CA, USA
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
3Department of Neurology, Weill Institute for Neurosciences, University of California San Francisco; San Francisco, CA USA
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Elif G. Sozmen
1Gladstone Institutes; San Francisco, CA, USA
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
3Department of Neurology, Weill Institute for Neurosciences, University of California San Francisco; San Francisco, CA USA
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Karuna Dixit
1Gladstone Institutes; San Francisco, CA, USA
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
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Mauricio Montano
1Gladstone Institutes; San Francisco, CA, USA
4Michael Hulton Center for HIV Cure Research at Gladstone; San Francisco, CA, USA
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Yusuke Matsui
1Gladstone Institutes; San Francisco, CA, USA
4Michael Hulton Center for HIV Cure Research at Gladstone; San Francisco, CA, USA
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Yixin Liu
1Gladstone Institutes; San Francisco, CA, USA
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
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Ekram Helmy
1Gladstone Institutes; San Francisco, CA, USA
4Michael Hulton Center for HIV Cure Research at Gladstone; San Francisco, CA, USA
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Thomas J. Deerinck
5National Center for Microscopy and Imaging Research, Center for Research on Biological Systems, University of California San Diego; La Jolla, CA, USA
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Zhaoqi Yan
1Gladstone Institutes; San Francisco, CA, USA
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
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Renaud Schuck
1Gladstone Institutes; San Francisco, CA, USA
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
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Rosa Meza Acevedo
1Gladstone Institutes; San Francisco, CA, USA
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
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Collin M. Spencer
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
3Department of Neurology, Weill Institute for Neurosciences, University of California San Francisco; San Francisco, CA USA
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Reuben Thomas
1Gladstone Institutes; San Francisco, CA, USA
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Alexander R. Pico
1Gladstone Institutes; San Francisco, CA, USA
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  • ORCID record for Alexander R. Pico
Scott S. Zamvil
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
3Department of Neurology, Weill Institute for Neurosciences, University of California San Francisco; San Francisco, CA USA
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Kara L. Lynch
6Department of Laboratory Medicine, University of California San Francisco; San Francisco, CA, USA
7Zuckerberg San Francisco General Hospital; San Francisco, CA, USA
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Mark H. Ellisman
5National Center for Microscopy and Imaging Research, Center for Research on Biological Systems, University of California San Diego; La Jolla, CA, USA
8Department of Neurosciences, University of California San Diego; La Jolla, CA, USA
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Warner C. Greene
1Gladstone Institutes; San Francisco, CA, USA
4Michael Hulton Center for HIV Cure Research at Gladstone; San Francisco, CA, USA
9Departments of Medicine and Microbiology and Immunology, University of California San Francisco; San Francisco, CA, USA
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  • For correspondence: kakassoglou@gladstone.ucsf.edu warner.greene@gladstone.ucsf.edu
Katerina Akassoglou
1Gladstone Institutes; San Francisco, CA, USA
2Center for Neurovascular Brain Immunology at Gladstone and UCSF; San Francisco, CA USA
3Department of Neurology, Weill Institute for Neurosciences, University of California San Francisco; San Francisco, CA USA
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  • For correspondence: kakassoglou@gladstone.ucsf.edu warner.greene@gladstone.ucsf.edu
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Abstract

Blood clots are a central feature of coronavirus disease-2019 (COVID-19) and can culminate in pulmonary embolism, stroke, and sudden death. However, it is not known how abnormal blood clots form in COVID-19 or why they occur even in asymptomatic and convalescent patients. Here we report that the Spike protein from severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) binds to the blood coagulation factor fibrinogen and induces structurally abnormal blood clots with heightened proinflammatory activity. SARS-CoV-2 Spike virions enhanced fibrin-mediated microglia activation and induced fibrinogen-dependent lung pathology. COVID-19 patients had fibrin autoantibodies that persisted long after acute infection. Monoclonal antibody 5B8, targeting the cryptic inflammatory fibrin epitope, inhibited thromboinflammation. Our results reveal a procoagulant role for the SARS-CoV-2 Spike and propose fibrin-targeting interventions as a treatment for thromboinflammation in COVID-19.

One-Sentence Summary SARS-CoV-2 spike induces structurally abnormal blood clots and thromboinflammation neutralized by a fibrin-targeting antibody.

Competing Interest Statement

KA is a co-founder, scientific advisor and board director of Therini Bio. KA is the inventor of the 5B8 patent. KA, JKR, MM and WCG are inventors on a patent application for 5B8 use in COVID-19. KA, JKR, MM, EGS and WCG are inventors on a patent application related to Spike-induced thromboinflammation model. KA and JKR are inventors on fibrin assay patents. Their interests are managed in accordance with their respective institutions conflict of interest policy.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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SARS-CoV-2 spike protein induces abnormal inflammatory blood clots neutralized by fibrin immunotherapy
Jae Kyu Ryu, Elif G. Sozmen, Karuna Dixit, Mauricio Montano, Yusuke Matsui, Yixin Liu, Ekram Helmy, Thomas J. Deerinck, Zhaoqi Yan, Renaud Schuck, Rosa Meza Acevedo, Collin M. Spencer, Reuben Thomas, Alexander R. Pico, Scott S. Zamvil, Kara L. Lynch, Mark H. Ellisman, Warner C. Greene, Katerina Akassoglou
bioRxiv 2021.10.12.464152; doi: https://doi.org/10.1101/2021.10.12.464152
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SARS-CoV-2 spike protein induces abnormal inflammatory blood clots neutralized by fibrin immunotherapy
Jae Kyu Ryu, Elif G. Sozmen, Karuna Dixit, Mauricio Montano, Yusuke Matsui, Yixin Liu, Ekram Helmy, Thomas J. Deerinck, Zhaoqi Yan, Renaud Schuck, Rosa Meza Acevedo, Collin M. Spencer, Reuben Thomas, Alexander R. Pico, Scott S. Zamvil, Kara L. Lynch, Mark H. Ellisman, Warner C. Greene, Katerina Akassoglou
bioRxiv 2021.10.12.464152; doi: https://doi.org/10.1101/2021.10.12.464152

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