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Multi-model Order ICA: A Data-driven Method for Evaluating Brain Functional Network Connectivity Within and Between Multiple Spatial Scales

Xing Meng, Armin Iraji, Zening Fu, View ORCID ProfilePeter Kochunov, Aysenil Belger, Judy M. Ford, Sara McEwen, Daniel H. Mathalon, Bryon A. Mueller, Godfrey Pearlson, Steven G. Potkin, Adrian Preda, Jessica Turner, Theo G.M. van Erp, View ORCID ProfileJing Sui, View ORCID ProfileVince D. Calhoun
doi: https://doi.org/10.1101/2021.10.24.465635
Xing Meng
1Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State, Georgia Tech, Emory University, Atlanta, GA, USA
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Armin Iraji
1Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State, Georgia Tech, Emory University, Atlanta, GA, USA
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Zening Fu
1Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State, Georgia Tech, Emory University, Atlanta, GA, USA
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Peter Kochunov
4Maryland Psychiatric Research Center, Department of Psychiatry, School of Medicine, University of Maryland, Baltimore, MD, USA
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Aysenil Belger
5Department of Psychiatry, University of North Carolina, Chapel Hill, NC, USA
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Judy M. Ford
6Department of Psychiatry, University of California San Francisco, San Francisco, CA, USA
7San Francisco VA Medical Center, San Francisco, CA, USA
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Sara McEwen
8Department of Psychiatry and Biobehavioral Sciences, University of California Los Angeles, Los Angeles, CA, USA
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Daniel H. Mathalon
6Department of Psychiatry, University of California San Francisco, San Francisco, CA, USA
7San Francisco VA Medical Center, San Francisco, CA, USA
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Bryon A. Mueller
9Department of Psychiatry, University of Minnesota, Minneapolis, MN, USA
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Godfrey Pearlson
10Departments of Psychiatry and Neuroscience, Yale University, School of Medicine, New Haven, CT, USA
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Steven G. Potkin
11Department of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA, USA
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Adrian Preda
11Department of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA, USA
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Jessica Turner
1Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State, Georgia Tech, Emory University, Atlanta, GA, USA
12Department of Psychology, Georgia State University, Atlanta, GA, USA
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Theo G.M. van Erp
13Clinical Translational Neuroscience Laboratory, Department of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA, USA
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Jing Sui
1Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State, Georgia Tech, Emory University, Atlanta, GA, USA
2Brainnetome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing, China
3University of Chinese Academy of Sciences, Beijing, China
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Vince D. Calhoun
1Tri-Institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State, Georgia Tech, Emory University, Atlanta, GA, USA
12Department of Psychology, Georgia State University, Atlanta, GA, USA
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  • For correspondence: vcalhoun@gsu.edu
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Abstract

Background While functional connectivity is widely studied, there has been little work studying functional connectivity at different spatial scales. Likewise, the relationship of functional connectivity between spatial scales is unknown.

Methods We proposed an independent component analysis (ICA) - based approach to capture information at multiple model orders (component numbers) and to evaluate functional network connectivity (FNC) both within and between model orders. We evaluated the approach by studying group differences in the context of a study of resting fMRI (rsfMRI) data collected from schizophrenia (SZ) individuals and healthy controls (HC). The predictive ability of FNC at multiple spatial scales was assessed using support vector machine (SVM)-based classification.

Results In addition to consistent predictive patterns at both multiple-model orders and single model orders, unique predictive information was seen at multiple-model orders and in the interaction between model orders. We observed that the FNC between model order 25 and 50 maintained the highest predictive information between HC and SZ. Results highlighted the predictive ability of the somatomotor and visual domains both within and between model orders compared to other functional domains. Also, subcortical-somatomotor, temporal-somatomotor, and temporal-subcortical FNCs had relatively high weights in predicting SZ.

Conclusions In sum, multi-model order ICA provides a more comprehensive way to study FNC, produces meaningful and interesting results which are applicable to future studies. We shared the spatial templates from this work at different model orders to provide a reference for the community, which can be leveraged in regression-based or fully automated (spatially constrained) ICA approaches.

Impact Statement Multi-model order ICA provides a comprehensive way to study brain functional network connectivity within and between multiple spatial scales, highlighting findings that would have been ignored in single model order analysis. This work expands upon and adds to the relatively new literature on resting fMRI-based classification and prediction. Results highlighted the differentiating power of specific intrinsic connectivity networks on classifying brain disorders of schizophrenia patients and healthy participants, at different spatial scales. The spatial templates from this work provide a reference for the community, which can be leveraged in regression-based or fully automated ICA approaches.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Xing Meng: xmeng{at}gsu.edu

  • Armin Iraji: airaji{at}gsu.edu

  • Zening Fu: zfu{at}gsu.edu

  • Peter Kochunov: pkochunov{at}gmail.com

  • Aysenil Belger: aysenil_belger{at}med.unc.edu

  • Judy M. Ford: Judith.Ford{at}ucsf.edu

  • Sara McEwen: sjacobson{at}psych.ucla.edu

  • Daniel H. Mathalon: daniel.mathalon{at}ucsf.edu

  • Bryon A. Mueller: muell093{at}gmail.com

  • Godfrey Pearlson: Godfrey.Pearlson{at}hhchealth.org

  • Steven G. Potkin: sgpotkin{at}uci.edu

  • Adrian Preda: apreda{at}uci.edu

  • Jessica Turner: jturner63{at}gsu.ed

  • Theo G.M. van Erp: tvanerp{at}uci.edu

  • Jing Sui: jing.sui{at}nlpr.ia.ac.cn

  • Vince D. Calhoun: vcalhoun{at}gsu.edu

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted October 27, 2021.
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Multi-model Order ICA: A Data-driven Method for Evaluating Brain Functional Network Connectivity Within and Between Multiple Spatial Scales
Xing Meng, Armin Iraji, Zening Fu, Peter Kochunov, Aysenil Belger, Judy M. Ford, Sara McEwen, Daniel H. Mathalon, Bryon A. Mueller, Godfrey Pearlson, Steven G. Potkin, Adrian Preda, Jessica Turner, Theo G.M. van Erp, Jing Sui, Vince D. Calhoun
bioRxiv 2021.10.24.465635; doi: https://doi.org/10.1101/2021.10.24.465635
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Multi-model Order ICA: A Data-driven Method for Evaluating Brain Functional Network Connectivity Within and Between Multiple Spatial Scales
Xing Meng, Armin Iraji, Zening Fu, Peter Kochunov, Aysenil Belger, Judy M. Ford, Sara McEwen, Daniel H. Mathalon, Bryon A. Mueller, Godfrey Pearlson, Steven G. Potkin, Adrian Preda, Jessica Turner, Theo G.M. van Erp, Jing Sui, Vince D. Calhoun
bioRxiv 2021.10.24.465635; doi: https://doi.org/10.1101/2021.10.24.465635

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