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Synthetic periphyton as a model system to understand species dynamics in complex microbial freshwater communities

View ORCID ProfileOlga Lamprecht, Bettina Wagner, View ORCID ProfileNicolas Derlon, View ORCID ProfileAhmed Tlili
doi: https://doi.org/10.1101/2021.10.31.466637
Olga Lamprecht
aEawag: Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland
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Bettina Wagner
aEawag: Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland
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Nicolas Derlon
aEawag: Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland
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Ahmed Tlili
aEawag: Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland
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  • ORCID record for Ahmed Tlili
  • For correspondence: ahmed.tlili@eawag.ch
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Abstract

Phototrophic biofilms, also known as periphyton, are microbial freshwater communities that drive crucial ecological processes in streams and lakes. Gaining a deep mechanistic understanding of the biological processes occurring in natural periphyton remains challenging due to the high complexity and variability of such communities. To address this challenge, we rationally developed a workflow to construct a synthetic community by co-culturing 26 phototrophic species (i.e., diatoms, green algae and cyanobacteria) that were inoculated in a successional sequence to create a periphytic biofilm on glass slides. We show that this community is diverse, stable and highly reproducible in terms of microbial composition, function and 3D spatial structure of the biofilm. We also demonstrate the ability to monitor microbial dynamics at the single species level during periphyton development and how their abundances are impacted by stressors such as increased temperature and a herbicide, singly and in combination. Overall, such a synthetic periphyton, grown under controlled conditions, can be used as a model system for theory testing through targeted manipulation.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted April 30, 2022.
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Synthetic periphyton as a model system to understand species dynamics in complex microbial freshwater communities
Olga Lamprecht, Bettina Wagner, Nicolas Derlon, Ahmed Tlili
bioRxiv 2021.10.31.466637; doi: https://doi.org/10.1101/2021.10.31.466637
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Synthetic periphyton as a model system to understand species dynamics in complex microbial freshwater communities
Olga Lamprecht, Bettina Wagner, Nicolas Derlon, Ahmed Tlili
bioRxiv 2021.10.31.466637; doi: https://doi.org/10.1101/2021.10.31.466637

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