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Isolation of gametes and zygotes from Setaria viridis

View ORCID ProfileErika Toda, Takatoshi Kiba, Norio Kato, Takashi Okamoto
doi: https://doi.org/10.1101/2021.11.01.466850
Erika Toda
1Plant Breeding Innovation Laboratory, RIKEN Cluster for Science, Technology and Innovation Hub, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
2Department of Biological Sciences, Tokyo Metropolitan University, 1-1 Minami-osawa, Hachioji, Tokyo 192-0392, Japan
3Department of Biological Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
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  • For correspondence: etoda@g.ecc.u-tokyo.ac.jp
Takatoshi Kiba
1Plant Breeding Innovation Laboratory, RIKEN Cluster for Science, Technology and Innovation Hub, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
4Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan
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Norio Kato
1Plant Breeding Innovation Laboratory, RIKEN Cluster for Science, Technology and Innovation Hub, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
2Department of Biological Sciences, Tokyo Metropolitan University, 1-1 Minami-osawa, Hachioji, Tokyo 192-0392, Japan
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Takashi Okamoto
1Plant Breeding Innovation Laboratory, RIKEN Cluster for Science, Technology and Innovation Hub, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
2Department of Biological Sciences, Tokyo Metropolitan University, 1-1 Minami-osawa, Hachioji, Tokyo 192-0392, Japan
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Summary

Setaria viridis, the wild ancestor of foxtail millet (Setaria italica), is an effective model plant for larger C4 crops because it has several desirable traits, such as short generation time, prolific seed production and a small genome size. These advantages are well suited for investigating molecular mechanisms in angiosperms, especially C4 crop species. Here, we report a procedure for isolating gametes and zygotes from S. viridis flowers. To isolate egg cells, ovaries were harvested from unpollinated mature flowers and cut transversely, which allowed direct access to the embryo sac. Thereafter, an egg cell was released from the cut end of the basal portion of the dissected ovary. To isolate sperm cells, pollen grains released from anthers were immersed in a mannitol solution, resulting in pollen-grain bursting, which released sperm cells. Additionally, S. viridis zygotes were successfully isolated from freshly pollinated flowers. Isolated zygotes cultured in a liquid medium developed into globular-like embryos and cell masses. Thus, isolated S. viridis gametes, zygotes and embryos are attainable for detailed observations and investigations of fertilization and developmental events in angiosperms.

Introduction

In angiosperms, fertilization and subsequent developmental events, such as zygotic development/embryogenesis and endosperm development, occur in embryo sacs that are deeply embedded in ovular tissues (Nawaschin, 1898; Guignard, 1899; Russell, 1992; Raghavan, 2003). Consequently, investigations of fertilization and/or post-fertilization events in embryo sacs have been impeded by the inability to easily and directly analyze embedded female gametophytes. To overcome these difficulties, isolated gametes or zygotes have been used for analyzing the reproductive and developmental processes in embryo sacs. In the late 1980s, technical advances led to the successful isolation of viable gametes of angiosperm species (reviewed in Theunis et al., 1991). In addition to gamete isolation, fertilized egg cells (zygotes) have been successfully isolated in cereal crops, such as barley (Holm et al., 1994), maize (Leduc et al., 1996), wheat (Kumlehn et al., 1997, 1998) and rice (Zhang et al., 1999). Furthermore, over the last 15 years, isolated gametes, zygotes or embryos were successfully used for transcriptome analyses to identify genes expressed specifically or preferentially in female gametes, male gametes, zygotes and early embryos (Sprunck et al., 2005; Ning et al., 2006; Yang et al., 2006; Steffen et al., 2007; Borges et al., 2008; Wang et al., 2010; Wuest et al., 2010; Ohnishi et al., 2011; Abiko et al., 2013a; Anderson et al., 2013; Anderson et al., 2017; Chen et al., 2017; Rahman et al., 2019; Zhao et al., 2019; Zhao et al., 2020). The identified genes may be involved in reproductive or developmental processes, such as gamete differentiation, gamete fusion and early zygotic development. In addition to transcriptome analyses, proteins expressed in rice gametes were identified using proteomic analyses (Abiko et al., 2013b).

Green foxtail millet (Setaria viridis), which is the wild ancestor of foxtail millet (Setaria italica), is an effective model for larger C4 panicoid crops, such as switchgrass, guinea grass, maize and sorghum (reviewed in Li and Brutnell, 2011). Because S. viridis has several advantageous traits, such as a short generation time, simple growth requirements, prolific seed production and a diploid with a relatively small genome size of approximately 510 Mb (Brutnell et al., 2010; Li and Brutnell, 2011), it has recently been recognized as a new monocotyledonous model species that is now available in many laboratories. Therefore, gametes, zygotes and embryos isolated from S. viridis plants represent suitable materials for investigating the cellular and molecular mechanisms involved in zygote development and subsequent embryogenesis. Here, we established procedures in S. viridis for the isolation of gametes from unpollinated flowers and zygotes from pollinated flowers. In addition, the isolated S. viridis zygotes were cultured and their developmental profiles were observed.

Materials and methods

Plant materials

Seeds of Setaria viridis (accession A10.1) were provided by the Brutnell Laboratory (Brutnell et al., 2010). The mature seeds were planted in soil and grown in an environmental chamber (Nippon Medical and Chemical Instruments) at 26°C/24°C with a 13-h light/11-h dark photoperiod.

Isolation of gametes

For egg cell isolation, ovaries were harvested from unpollinated mature flowers using forceps and transferred to plastic dishes (φ 35 mm) containing 3 ml mannitol solution (370 mOsmol kg−1 H2O). After the ovaries were cut transversely using a thin razor blade, egg cells were released from the cut end of the basal portions of the dissected ovaries. To isolate sperm cells, anthers were harvested from unpollinated mature flowers and transferred to plastic dishes containing 3 ml mannitol solution (370 mOsmol kg−1 H2O). The anthers were broken in the mannitol solution using forceps to release the pollen grains, and thereafter, the pollen grains burst and released their contents, including sperm cells.

Isolation of zygotes

For zygote isolation, ovaries were harvested from pollinated flowers having fresh stigmata, which indicated that they had been pollinated on the day of harvest, and transferred to plastic dishes containing 3 ml mannitol solution (370 mOsmol kg−1 H2O). To collect zygotes efficiently, enlarged ovaries, in which embryogenesis and endosperm development had already progressed, were removed during the ovary-harvesting process. The isolated ovaries were cut as described above, and the cut ovaries were incubated in mannitol solution for approximately 1–2 h. Thereafter, the zygotes were released by gently pushing the cut end of the basal portions of dissected ovaries with a glass needle.

Culturing zygotes

Isolated zygotes were transferred into a 1-μl droplet of mannitol solution (370 mOsmol kg−1 H2O) overlaid with mineral oil on a coverslip (Okamoto, 2011) and washed three times by gently transferring the cells into droplets of fresh mannitol solution (450 mOsmol kg−1 H2O). Thereafter, the isolated zygotes were cultured in a Millicell-CM insert (Merck Millipore) containing N6Z (Uchiumi et al., 2007) or MSO (Kranz and Lörz, 1993) medium as described by Okamoto (2011). Zygotes were cultured at 26°C in darkness.

Results and Discussion

Developmental stages of S. viridis flowers

We first harvested panicles from S. viridis plants (Fig. 1a and 1b). Thereafter, S. viridis flowers at various developmental stages were harvested and dissected to determine the stages suitable for the isolation of gametes and zygotes. Figure 1c shows an unpollinated S. viridis flower. When the unpollinated flowers were dissected, immature ovaries with undeveloped anthers and stigmata (Fig. 1d and 1e) or putative mature ovaries with developed anthers and stigmata (Fig. 1f) were isolated. Pollination occurs when flowers open, and the flowers close again after pollination. Thereafter, the stigma remaining on the flower (Fig. 1g) is an indication of a pollinated flower. The pollinated flowers with fresh stigmata were harvested (Fig. 1g), and the ovaries were isolated from the pollinated flowers (Fig. 1h). The ovaries from the pollinated flowers having fresh stigmata were similar in size to unpollinated mature ovaries (Fig. 1f). Additionally, pollinated flowers with degenerated stigmata were harvested (Fig. 1i), and developing ovaries were isolated from the pollinated flowers (Fig. 1j and 1k). The flowering of S. viridis spikelets is triggered by the darkness of night and low temperatures (Rizal et al., 2013). Therefore, it was presumed that the flowers having fresh stigmata (Fig. 1g) were pollinated on the day of harvest, and that these freshly pollinated flowers would be suitable for isolating zygotes.

Figure 1.
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Figure 1.

Female and male reproductive organs harvested from unpollinated and pollinated S. viridis flowers. (a) S. viridis plants. (b) A panicle. (c) An unpollinated flower. (d–f) Immature (d and e) and mature (f) pistils and anthers harvested from unpollinated flowers. (g) A pollinated flower having a fresh stigma. (h) An ovary harvested from a pollinated flower having a fresh stigma. (i) A pollinated flower having a degraded stigma. (j and k) Ovaries harvested from the pollinated flowers. Stigmata and anthers of pollinated flowers were removed during the ovary isolation process. Arrowheads in panels (g) and (i) indicate fresh and degenerated stigmata, respectively. Bars = 5 mm in (b) and 0.5 mm in (c–k).

Isolation of S. viridis egg cells

For egg cell isolation, mature ovaries harvested from the unpollinated flowers (Fig. 2a) were transferred into a mannitol solution adjusted to 370 mOsmol kg−1 H2O, as in the procedure for isolating rice egg cells (Uchiumi et al., 2006), and the ovaries were cut transversely in the mannitol solution (Fig. 2b). Putative egg cells were released from the cut end of the basal portions of the dissected ovaries (Fig. 2c and 2d). Furthermore, an egg apparatus, consisting of an egg cell and two synergid cells, which is a characteristic feature of angiosperms, was also released (Fig. 2e). The S. viridis egg cells and synergid cells were approximately 30 μm in diameter (Fig. 2e), and the isolated putative egg cells (Fig. 2c and 2d) were almost similar in size to the egg cells in the egg apparatuses (Fig. 2e). The S. viridis egg cells were smaller than those of maize (60–77 μm; Kranz et al., 1991), wheat (50–70 μm; Kovacs et al., 1994) and rice (40–50 μm; Uchiumi et al., 2006), but were similar to those of Brachypodium (30–35 μm; Matsumura and Okamoto, 2016). In addition, the isolated S. viridis egg cells showed many putative vacuoles, ranging in size from approximately 6 to 10 μm, that existed at their peripheral regions (Fig. 2e). The peripheral localization of vacuoles is consistent with the cellular characteristics of egg cells isolated from maize (Faure et al., 1992), wheat (Kovacs et al., 1994), rice (Uchiumi et al., 2007) and Brachypodium (Matsumura and Okamoto, 2016), suggesting that the cells isolated from the ovaries are egg cells.

Figure 2.
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Figure 2.

Isolation of S. viridis gametes and the developmental profiles of zygotes isolated from pollinated flowers. (a) An ovary harvested from unpollinated mature flower. (b) An isolated ovary. (c) An egg cell (arrowhead) released from the cut end of the basal portion of a dissected ovary. (d) An isolated egg cell. (e) An egg apparatus consisting of an egg cell and two synergid cells. (f) A pollen grain. (g) Two sperm cells released from a pollen grain. (h) Isolated sperm cells. After 2 days of culturing, the isolated zygote (i) developed into a globular-like embryo (j) and after 3, 5 and 6 days of culturing, a growing cell mass was observed (k–m). The dotted black line in (b) indicates the cutting line on the ovary for egg cell isolation. Arrowheads in (c) and (e) indicate the isolated egg cells and the egg cell of an egg apparatus, respectively. Arrows in (e) indicate the synergid cells of an egg apparatus. Asterisks in (e) indicate putative vacuoles in the egg cell. The arrow and arrowheads in (g) indicate a pollen grain releasing its contents and the released sperm cells, respectively. Bars = 0.5 mm in (a), 100 μm in (b), 50 μm in (c) and (g), 20 μm in (d–f), (h) and (i–m).

Isolation of S. viridis sperm cells

When pollen grains are soaked in an appropriate osmotic solution, they generally burst and release their contents, including sperm cells (Kranz et al., 1991; Theunis et al., 1991). Therefore, we applied the osmotic bursting technique to isolate sperm cells from S. viridis pollen grains. Anthers were harvested from unpollinated mature flowers (Fig. 2a) and transferred into a mannitol solution adjusted to 370 mOsmol kg−1 H2O. The anthers were broken in the mannitol solution using forceps to release the pollen grains (Fig. 2f). After 5–10 min of the pollen grains being immersed in the mannitol solution, the grains burst and released their contents, including two sperm cells (Fig. 2g) because S. viridis plants form tricellular-type pollen grains. The S. viridis pollen grains and sperm cells were approximately 40 μm and 5 μm in diameter, respectively (Fig. 2f and 2h). Notably, the pollen grains isolated from immature unpollinated flowers (Fig. 1d and 1e) rarely burst and released their contents (data not shown), indicating that mature pollen grains are appropriate for the isolation of S. viridis sperm cells. Previously, S. viridis sperm cells had been successfully isolated through the immersion of pollen grains in a mannitol solution and used for in vitro fusions with isolated wheat gametes (Li et al., 2019). In Li et al. (2019), the sperm cells were released in 6%–12% mannitol solutions. We also successfully isolated S. viridis sperm cells using a mannitol solution adjusted to 370 mOsmol kg−1 H2O (approximately 6% concentration), suggesting that S. viridis sperm cells adapt to a wide osmolarity range.

Isolation of S. viridis zygotes and their developmental profiles

The zygotes (1-celled embryos) were isolated from pollinated flowers having fresh stigmata (Fig. 1g). The isolated ovaries (Fig. 1h) were transferred into a mannitol solution (370 mOsmol kg−1 H2O) and cut transversely using a thin razor blade, as in the isolation of S. viridis egg cells. Thereafter, the dissected ovaries were incubated in the mannitol solution for approximately 1–2 h because the putative zygotes easily burst just after the ovaries were dissected. After the incubation, a putative zygote was released from the cut end of the basal portion of each dissected ovary by gently pushing with a glass needle (Fig. 2i). To monitor their developmental profiles, the isolated putative S. viridis zygotes were cultured in a Millicell-CM insert containing the N6Z culture medium, which has been used for culturing zygotes of barley (Kumlehn et al., 1999), rice (Uchiumi et al., 2007) and wheat (Maryenti et al., 2019). After 2 days of culturing, the cells developed into globular-like embryos (Fig. 2j) and continued undergoing cell division, forming cell masses, until approximately 6 days after culturing began (Fig. 2k–m). This indicated that the cells isolated from pollinated flowers are zygotes capable of developing into embryos. The developmental ratio of the isolated zygotes was 35.7% (n = 10/28; Table 1).

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Table 1.

Developmental profiles of isolated S. viridis zygotes

Although the zygotes divided and reached the cell mass stage, the development of the cell masses was arrested. Therefore, we cultured the isolated S. viridis zygotes in MSO medium, which has been used for culturing maize zygotes (Kranz and Lörz, 1993) because S. viridis, like maize, is C4 crop species. However, the ratio of the isolated zygotes that developed to the cell mass stage in the MSO medium was similar to that in the N6Z medium (n = 3/10, Table 1), and the cell masses also underwent developmental arrest. Because the shape of the isolated putative zygotes (Fig. 2i) was similar to that of the isolated egg cells (Fig. 2d), it was difficult to discriminate precisely between the two and to isolate only zygotes in which fertilization had successfully occurred. Therefore, the developmental ratio may have been affected by the contamination of egg cells isolated from pollinated flowers with unsuccessful gamete fusions.

Uses of isolated gametes and zygotes in further investigations

In the present study, we established procedures in S. viridis for the isolation of gametes from unpollinated mature flowers and of zygotes from pollinated flowers. Moreover, the isolated zygotes were cultured in a liquid medium, resulting in their successful development into globular-like embryos and cell masses. To observe and analyze the detailed processes of fertilization and post-fertilization in angiosperms, such as karyogamy (Faure et al., 1993; Ohnishi et al., 2014), male chromatin decondensation in zygotes (Scholten et al., 2002), zygotic initiation (Rahman et al., 2019) and development (Kranz et al., 1995), parental genome contributions to zygotic development (Toda et al., 2016, 2018) and fertilization-induced or - suppressed gene expression (Okamoto et al., 2005; Rahman et al., 2019), isolated gametes have been used to produce a zygote through the in vitro fusion of an egg cell and a sperm cell. Using isolated gametes, complete in vitro fertilization (IVF) systems have been established in three major crop species, maize (Kranz and Lörz, 1993), rice (Uchiumi et al., 2007) and wheat (Maryenti et al., 2019). An IVF system using the present gamete-isolating techniques would allow the investigation of zygotic development and embryogenesis directly in S. viridis, although further culture condition improvements will be required to obtain plantlets from isolated zygotes. Furthermore, the isolated gametes and zygotes may be used for a wide range of single cell-type omics analyses. Thus, the present procedures for isolating S. viridis gametes and zygotes are widely applicable to the investigation of cellular and molecular mechanisms involved in fertilization processes, post-fertilization events, zygotic development and embryogenesis in angiosperms, particularly in C4 crop species.

Financial Support

This research received no specific grant from any funding agency, commercial or not-for-profit sectors.

Conflict of interest

The authors declare that they have no conflicts of interest.

Ethical standards

Not applicable.

Acknowledgements

We thank Dr. T. P. Brutnell (Chinese Academy of Agricultural Sciences, China) for providing seeds of S. viridis, Ms. A. Takebayashi (RIKEN, Japan) for preparing S. viridis plants, and the RIKEN Bio Resource Center (Tsukuba, Japan) for providing cultured rice cells (Oc line).

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Isolation of gametes and zygotes from Setaria viridis
Erika Toda, Takatoshi Kiba, Norio Kato, Takashi Okamoto
bioRxiv 2021.11.01.466850; doi: https://doi.org/10.1101/2021.11.01.466850
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Isolation of gametes and zygotes from Setaria viridis
Erika Toda, Takatoshi Kiba, Norio Kato, Takashi Okamoto
bioRxiv 2021.11.01.466850; doi: https://doi.org/10.1101/2021.11.01.466850

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