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Xist-mediated silencing requires additive functions of SPEN and Polycomb together with differentiation-dependent recruitment of SmcHD1

View ORCID ProfileJoseph S. Bowness, View ORCID ProfileTatyana B. Nesterova, View ORCID ProfileGuifeng Wei, View ORCID ProfileLisa Rodermund, View ORCID ProfileMafalda Almeida, View ORCID ProfileHeather Coker, View ORCID ProfileEmma J. Carter, Artun Kadaster, View ORCID ProfileNeil Brockdorff
doi: https://doi.org/10.1101/2021.11.02.466758
Joseph S. Bowness
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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Tatyana B. Nesterova
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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  • ORCID record for Tatyana B. Nesterova
Guifeng Wei
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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Lisa Rodermund
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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Mafalda Almeida
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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  • ORCID record for Mafalda Almeida
Heather Coker
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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  • ORCID record for Heather Coker
Emma J. Carter
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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Artun Kadaster
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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Neil Brockdorff
1Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
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  • ORCID record for Neil Brockdorff
  • For correspondence: neil.brockdorff@bioch.ox.ac.uk
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Summary

X chromosome inactivation (XCI) is mediated by the non-coding RNA Xist which directs chromatin modification and gene silencing in cis. The RNA binding protein SPEN and associated corepressors have a central role in Xist-mediated gene silencing. Other silencing factors, notably the Polycomb system, have been reported to function downstream of SPEN. In recent work we found that SPEN has an additional role in correct localisation of Xist RNA in cis, indicating that its contribution to chromatin-mediated gene silencing needs to be reappraised. Making use of a SPEN separation-of-function mutation we show that SPEN and Polycomb pathways in fact function in parallel to establish gene silencing. Additionally, we find that differentiation-dependent recruitment of the chromosomal protein SmcHD1 is required for silencing many X-linked genes. Our results provide important insights into the mechanism of X inactivation and the coordination of chromatin-based gene regulation with cellular differentiation and development.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted November 02, 2021.
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Xist-mediated silencing requires additive functions of SPEN and Polycomb together with differentiation-dependent recruitment of SmcHD1
Joseph S. Bowness, Tatyana B. Nesterova, Guifeng Wei, Lisa Rodermund, Mafalda Almeida, Heather Coker, Emma J. Carter, Artun Kadaster, Neil Brockdorff
bioRxiv 2021.11.02.466758; doi: https://doi.org/10.1101/2021.11.02.466758
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Xist-mediated silencing requires additive functions of SPEN and Polycomb together with differentiation-dependent recruitment of SmcHD1
Joseph S. Bowness, Tatyana B. Nesterova, Guifeng Wei, Lisa Rodermund, Mafalda Almeida, Heather Coker, Emma J. Carter, Artun Kadaster, Neil Brockdorff
bioRxiv 2021.11.02.466758; doi: https://doi.org/10.1101/2021.11.02.466758

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