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Validation and invalidation of SARS-CoV-2 papain-like protease inhibitors

Chunlong Ma, View ORCID ProfileJun Wang
doi: https://doi.org/10.1101/2021.11.04.467342
Chunlong Ma
†Department of Pharmacology and Toxicology, College of Pharmacy, The University of Arizona, Tucson, Arizona 85721, United States
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Jun Wang
†Department of Pharmacology and Toxicology, College of Pharmacy, The University of Arizona, Tucson, Arizona 85721, United States
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  • ORCID record for Jun Wang
  • For correspondence: junwang@pharmacy.arizona.edu
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Abstract

SARS-CoV-2 encodes two viral cysteine proteases, the main protease (Mpro) and the papain-like protease (PLpro), both of which are validated antiviral drug targets. The PLpro is involved in the cleavage of viral polyproteins as well as immune modulation through removing ubiquitin and interferon-stimulated gene product 15 (ISG15) from host proteins. Therefore, targeting PLpro might be a two-pronged approach. Several compounds including YM155, cryptotanshinone, tanshinone I, dihydrotanshinone I, tanshinone IIA, SJB2-043, 6-thioguanine, and 6-mercaptopurine were recently identified as SARS-CoV-2 PLpro inhibitors through high-throughput screening. In this study, we aim to validate/invalidate the reported PLpro inhibitors using a combination of PLpro target specific assays including enzymatic FRET assay, thermal shift binding assay (TSA), and the cell based FlipGFP assay. Collectively, our results showed that all compounds tested either did not show binding or led to denaturation of the PLpro in the TSA binding assay, which might explain their weak enzymatic inhibition in the FRET assay. In addition, none of the compounds showed cellular inhibition of PLpro as revealed by the FlipGFP assay. Therefore, more efforts are needed to search for specific and potent SARS-CoV-2 PLpro inhibitors.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted November 05, 2021.
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Validation and invalidation of SARS-CoV-2 papain-like protease inhibitors
Chunlong Ma, Jun Wang
bioRxiv 2021.11.04.467342; doi: https://doi.org/10.1101/2021.11.04.467342
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Validation and invalidation of SARS-CoV-2 papain-like protease inhibitors
Chunlong Ma, Jun Wang
bioRxiv 2021.11.04.467342; doi: https://doi.org/10.1101/2021.11.04.467342

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