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Key Factors Governing Initial Stages of Lipid Droplet Formation

Siyoung Kim, Chenghan Li, Robert V. Farese Jr., Tobias C. Walther, Gregory A. Voth
doi: https://doi.org/10.1101/2021.11.12.468423
Siyoung Kim
1Pritzker School of Molecular Engineering, The University of Chicago, Chicago, IL, 60637 USA
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Chenghan Li
2Department of Chemistry, Chicago Center for Theoretical Chemistry, James Franck Institute, and Institute for Biophysical Dynamics, The University of Chicago, Chicago, IL, 60637 USA
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Robert V. Farese Jr.
3Department of Molecular Metabolism, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA
4Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA
5Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA
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Tobias C. Walther
3Department of Molecular Metabolism, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA
4Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA
5Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA
6Howard Hughes Medical Institute, Boston, MA 02115, USA
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Gregory A. Voth
2Department of Chemistry, Chicago Center for Theoretical Chemistry, James Franck Institute, and Institute for Biophysical Dynamics, The University of Chicago, Chicago, IL, 60637 USA
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  • For correspondence: gavoth@uchicago.edu
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ABSTRACT

Lipid droplets (LDs) are neutral lipid storage organelles surrounded by a phospholipid (PL) monolayer. LD biogenesis from the endoplasmic reticulum (ER) is driven by phase separation of neutral lipids, overcoming surface tension and membrane deformation. However, the core biophysics of the initial steps of LD formation remain relatively poorly understood. Here, we use a tunable, phenomenological coarse-grained (CG) model to study triacylglycerol (TG) nucleation in a bilayer membrane. We show that PL rigidity has a strong influence on TG lensing and membrane remodeling: When membrane rigidity increases, TG clusters remain more planar with high anisotropy but a minor degree of phase nucleation. This finding is confirmed by free energy sampling simulations that calculate the potential of mean force (PMF) as a function of the degree of nucleation and anisotropy. We also show that asymmetric tension, controlled by the number of PLs on each membrane leaflet, determines the budding direction. A TG lens buds in the direction of the monolayer containing excess PLs to allow for better PL coverage of TG, consistent with reported experiments. Finally, two governing mechanisms of the LD growth, Ostwald ripening and merging, are observed. Taken together, this study characterizes the interplay between two thermodynamic quantities during the initial LD phases, the TG bulk free energy and membrane remodeling energy.

Competing Interest Statement

The authors have declared no competing interest.

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Posted November 13, 2021.
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Key Factors Governing Initial Stages of Lipid Droplet Formation
Siyoung Kim, Chenghan Li, Robert V. Farese Jr., Tobias C. Walther, Gregory A. Voth
bioRxiv 2021.11.12.468423; doi: https://doi.org/10.1101/2021.11.12.468423
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Key Factors Governing Initial Stages of Lipid Droplet Formation
Siyoung Kim, Chenghan Li, Robert V. Farese Jr., Tobias C. Walther, Gregory A. Voth
bioRxiv 2021.11.12.468423; doi: https://doi.org/10.1101/2021.11.12.468423

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