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Detection of insect health with deep learning on near-infrared sensor data

View ORCID ProfileEmily Bick, View ORCID ProfileSam Edwards, View ORCID ProfileHenrik H. De Fine Licht
doi: https://doi.org/10.1101/2021.11.15.468635
Emily Bick
1Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark
2FaunaPhotonics ApS, Støberigade 14, 2450 Copenhagen SV, Denmark
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  • For correspondence: emily.bick@plen.ku.dk
Sam Edwards
1Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark
3Living Systems Institute, Biosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, United Kingdom
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Henrik H. De Fine Licht
1Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark
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Abstract

Conventional monitoring methods for disease vectors, pollinators or agricultural pests require time-consuming trapping and identification of individual insects. Automated optical sensors that detect backscattered near-infrared modulations created by flying insects are increasingly used to identify and count live insects, but do not inform about the health status of individual insects. Here we show that deep learning in trained convolutional neural networks in conjunction with sensors is a promising emerging method to detect infected insects. Health status was correctly determined in 85.6% of cases as early as two days post infection with a fungal pathogen. The ability to monitor insect health in real-time potentially has wide-reaching implications for preserving pollinator biodiversity and the rapid assessment of disease carrying individuals in vector populations.

One sentence summary Automated optical sensors distinguish between fungus-infected and healthy insects.

Competing Interest Statement

Per conditions of the Danish Innovation Fund grant (9066-00051A), EB is funded in part by FaunaPhotonics, Aps.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 16, 2021.
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Detection of insect health with deep learning on near-infrared sensor data
Emily Bick, Sam Edwards, Henrik H. De Fine Licht
bioRxiv 2021.11.15.468635; doi: https://doi.org/10.1101/2021.11.15.468635
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Detection of insect health with deep learning on near-infrared sensor data
Emily Bick, Sam Edwards, Henrik H. De Fine Licht
bioRxiv 2021.11.15.468635; doi: https://doi.org/10.1101/2021.11.15.468635

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