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Polyelectrolyte Nanocomplex Formation Combined with Electrostatic Self-Assembly Enables the Co-Delivery of Synergistic Antimicrobials to Treat Bacterial Biofilms

View ORCID ProfileJoel A. Finbloom, Preethi Raghavan, View ORCID ProfileBhushan N. Kharbikar, View ORCID ProfileMichelle A. Yu, Tejal A. Desai
doi: https://doi.org/10.1101/2021.11.22.469570
Joel A. Finbloom
1Department of Bioengineering and Therapeutic Sciences. University of California, San Francisco. San Francisco, CA, USA
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  • For correspondence: Joel.Finbloom@ucsf.edu Michelle.Yu2@ucsf.edu Tejal.Desai@ucsf.edu
Preethi Raghavan
1Department of Bioengineering and Therapeutic Sciences. University of California, San Francisco. San Francisco, CA, USA
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Bhushan N. Kharbikar
1Department of Bioengineering and Therapeutic Sciences. University of California, San Francisco. San Francisco, CA, USA
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Michelle A. Yu
2Division of Pulmonary and Critical Care Medicine. University of California, San Francisco. San Francisco, CA, USA
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  • ORCID record for Michelle A. Yu
  • For correspondence: Joel.Finbloom@ucsf.edu Michelle.Yu2@ucsf.edu Tejal.Desai@ucsf.edu
Tejal A. Desai
1Department of Bioengineering and Therapeutic Sciences. University of California, San Francisco. San Francisco, CA, USA
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  • For correspondence: Joel.Finbloom@ucsf.edu Michelle.Yu2@ucsf.edu Tejal.Desai@ucsf.edu
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Abstract

New approaches are needed to treat bacterial biofilm infections, particularly those of Pseudomonas aeruginosa (PA). PA biofilms have high rates of antimicrobial resistance and are commonly found in chronic wound and cystic fibrosis lung infections. The use of combination therapeutics that act synergistically is a promising treatment strategy; however, the delivery of multiple therapeutics at relevant dosages is challenging in the clinic. We therefore developed a new nanoscale drug carrier by combining approaches from both polyelectrolyte nanocomplex (NC) formation and layer-by-layer electrostatic self-assembly. This strategy led to NC drug carriers functionalized with both tobramycin antibiotics and antimicrobial silver nanoparticles with high loading efficiencies. AgTob-NCs displayed synergistic enhancements in antimicrobial activity against planktonic and biofilm PA cultures, with positively charged NCs demonstrating complete biofilm eradication. Overall, this approach shows promise in the co-delivery of diverse classes of antimicrobials to overcome antimicrobial resistance and treat bacterial biofilm infections.

1. Introduction

Antimicrobial resistance (AMR) is a global health crisis recognized by the CDC and the WHO as a dire threat to human health. Increasing rates of AMR bacterial infections are outcompeting the development of new antibiotics, and deaths from AMR infections are estimated to increase to over 10,000,000 annual deaths by 2050.1 A major mechanism of antimicrobial resistance in bacterial infections is the development of bacterial biofilms, where bacteria encase themselves within heterogeneous biological hydrogels of extracellular DNA, polysaccharides, and protein filaments.2 Biofilm formation directly increases bacterial virulence and leads to AMR mechanisms such as limited antibiotic penetration and increased expression of efflux pumps.2–5 Bacterial biofilms are estimated to occur in up to 80% of human infections and can be up to 1000 times more resistant to antibiotics when compared to planktonic bacteria.2 Biofilm infections are particularly prevalent within chronic wounds such as diabetic skin ulcers, as well as in lung infections of cystic fibrosis (CF) patients. In the lungs of CF patients, the viscous mucus layer caused by ineffective mucus clearance by epithelial cells poses an additional challenging barrier to effective bacterial treatment.6–8 CF patients are thus chronically colonized by bacterial biofilms, particularly those of Pseudomonas aeruginosa (PA) bacteria, which once established are nearly impossible to eradicate.7,9–11 Chronic colonization by Pseudomonas greatly impacts CF patients’ morbidity and mortality to such extents that continuous month-long courses of inhaled tobramycin and inhaled aztreonam antibiotics are often used to suppress pathologic Pseudomonas strains from developing even when the patient is well. Upon developing an exacerbation, CF patients undergo additional parenteral antibiotics for 2 weeks, which leaves them particularly vulnerable to developing colonization with AMR bacteria.

The co-delivery of synergistic antimicrobial drugs could improve the treatment of AMR bacterial biofilm infections.12,13 These drug combinations can function in parallel to target orthogonal mechanisms and prevent the evolution of resistance pathways. Alternatively, combination therapeutics can work together to enhance a singular pathway, such as by facilitating increased uptake of an antibiotic for enhanced efficacy.6,11–15 One particularly promising combination of antimicrobial therapeutics is tobramycin and silver nanoparticles (AgNPs). Tobramycin (Tob) is an aminoglycoside antibiotic that is the backbone of most antibiotic therapies used in CF exacerbations due to PA. Several studies have demonstrated that tobramycin and AgNPs act synergistically to overcome resistance and treat PA biofilms.16–19 While the exact mechanism of action has not yet been elucidated, it is hypothesized that AgNPs inhibit biofilm formation, increase membrane permeability for enhanced Tob uptake, and generate reactive oxygen species for direct bactericidal activities. Despite its potential, one major challenge to antimicrobial co-delivery is maintaining local therapeutic concentrations of both drugs at the same site of infection, particularly if the site is difficult to reach. This results in immense burdens for patients, who are frequently exposed to prolonged courses of antibiotics at potent doses, which increases patients’ risk for developing adverse reactions and AMR.6 For example, chronic osteomyelitis requires a duration of 2-6 weeks of parenteral antibiotics followed by 4-8 additional weeks of oral antibiotics and even then, the infections often cannot be eradicated.20 Therefore, new approaches are needed to enable therapeutic co-delivery, improve antimicrobial efficacies, and overcome resistant bacterial biofilm infections.6,21

Nanoparticle-based strategies to antimicrobial delivery have seen early preclinical success in sustained drug release and effective bacterial homing.22–30 Polymeric particles are widely used as nanoscale drug carriers, as they can be fabricated from biocompatible polymers, loaded with bioactive cargo, and delivered via inhalation.31–34 Additionally, polymeric particles have tunable properties such as size, shape, surface charge, and polymer composition, which can influence particle biodistribution, half-life, and interactions with biological barriers such as mucus and bacterial biofilm hydrogels.8,15,35,36 Polyelectrolyte nanocomplexes (NCs) are an emerging class of polymeric nanoparticle drug carrier, and are formed through electrostatic interactions between oppositely charged polymers.37,38 These NC drug carriers offer physicochemical tunability dependent on the polymer ratios, chemical structures, pKa’s, and molecular weights.37 NCs have further advantages in their ease of fabrication without specialized equipment, and in their high loading efficiencies of therapeutic cargos, especially for drugs of high charge densities,38–40 which often have low encapsulation efficiencies using other polymeric systems.41 However, to our knowledge, no examples of NCs have been reported for the co-delivery of antimicrobials, as NC formulations can be challenging to implement for the co-loading of diverse classes of cargo onto a single drug carrier.

To enable the co-delivery of tobramycin and AgNP antimicrobials to treat PA biofilms, we developed a new nanoscale drug carrier fabrication platform that combines approaches from polyelectrolyte nanocomplexation and layer-by-layer (LbL) electrostatic self-assembly. This new NC-LbL strategy led to the formation of NCs co-loaded with Tob and AgNPs (Figure 1a). These AgTob-NCs were fabricated from commercially available materials without the use of any specialized equipment or techniques. Additionally, AgTob-NCs offer tunability in particle size and surface charge to engineer the drug carrier biointerface and enhance antimicrobial activity. AgTob-NCs had high degrees of loading for both Tob (>75%) and AgNPs (>95%) and facilitated the co-delivery of Tob and AgNP antimicrobials to eradicate PA biofilms that were resistant to either treatment alone. This approach could see widespread use in enabling the co-delivery of diverse classes of antimicrobials to overcome recalcitrant biofilms such as those present in cystic fibrosis lung infections.

Figure 1.
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Figure 1.

Polyelectrolyte nanocomplex (NC) formation coupled with layer-by-layer (LbL) assembly enables the co-delivery of antimicrobials to treat AMR bacterial biofilm infections. (a) Complexation of tobramycin (positive charge) with dextran sulfate polymers (negative charge) led to the formation of NCs. The LbL addition of trimethyl chitosan and silver nanoparticles (AgNPs) facilitated the co-loading of antimicrobials onto NCs. Chemical structures of (b) tobramycin, (c) dextran sulfate, and (d) trimethyl chitosan (TMC). TMC contains units of chitin, chitosan, and TMC within the polymer, with TMC being the dominant unit.

2. Results and Discussion

2.1. Tobramycin Nanocomplex Fabrication and Characterization

To fabricate nanocomplexes (NCs) co-loaded with tobramycin and silver nanoparticles, NCs were first optimized to encapsulate tobramycin alone, followed by electrostatic layer-by-layer self-assembly with AgNPs (Figure 1a). Tobramycin is an aminoglycoside antibiotic with five potential sites for amine protonation (Figure 1b) and is therefore well-suited for electrostatic incorporation into polyelectrolyte NCs. Dextran sulfate (DS) was chosen as the complementary negatively charged polymer to form Tob-NCs, as its polysaccharide structure and dense negative charge (Figure 1c) make it ideal for complexation with positively charged tobramycin. Tobramycin and dextran sulfate were co-incubated together to form nanocomplexes, which were characterized for particle size and surface charge by dynamic light scattering and zeta potential measurements, respectively (Figure 2a). Tob encapsulation efficiencies were determined by fluorescent o-phthalaldehyde detection assays41 of particle suspension supernatants after centrifugation.

Figure 2.
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Figure 2.

Characterization of antimicrobial-functionalized nanocomplexes (NCs). (a) Hydrodynamic diameter (Dh, Zavg), polydispersity index (PDI), surface charge, and encapsulation efficiency (ee%) measurements for NC formulations, with varying ratios of tobramycin (Tob), dextran sulfate (DS), silver nanoparticles (AgNP), and trimethyl chitosan (TMC). Tob-NC 1c was used to fabricate AgTob-NCs. Both NC 2a and 2b demonstrated near-quantitative loading of AgNPs with a 1:2 mass ratio of Ag:Tob. NC 2b was functionalized with an additional 2.5 equiv of TMC to create positively charged particles. (b) SEM image of 2a. (c) SEM image of 2b. Scale bars = 2 μm. (d) Tob-NC design parameters with Tob:DS dependent trends for NC size and Tob encapsulation efficiency. (e) AgTob-NC design parameters for TMC-dependent NC size and charge.

NC formation conditions were optimized for pH and buffer type, with optimal conditions observed using 50 mM sodium acetate buffer at pH 4. This pH allowed for increased protonation of tobramycin amines while maintaining DS negative charge. Tob and DS co-incubation at pH 4 demonstrated increased particle formation when compared to pH 6, wherein no Tob encapsulation or particle formation was observed. Using these optimized conditions, we observed Tob:DS ratio-dependent trends in particle size, surface charge, and encapsulation efficiencies (Figure 2d). A mass ratio of 1:1 Tob:DS led to microparticles of positive charge that were highly polydisperse and had low Tob encapsulation efficiencies (ee%) of 39%. As the ratio of Tob:DS increased to 1:2, a significant increase in ee% was observed at 86%, however the particles were of ∼1.4 μm in diameter, likely too large to penetrate efficiently through bacterial biofilm hydrogels.8,42 At Tob:DS ratios of 1:3 and 1:4, 250-300 nm particles began to form, with encapsulation efficiencies at 58% (1:3) and 57% (1:4). Thus, Tob-NC 1c, corresponding to a Tob:DS ratio of 1:3 was chosen for subsequent AgNP loading and antimicrobial studies.

2.2. AgTob-NC Fabrication and Characterization

Tob-NCs 1b-1d displayed strong negative charges (Figure 2a), due to the mass ratios of <1 Tob:DS within the particles. As AgNPs also have a negatively charged surface owing to their citrate coatings, we employed a layer-by-layer (LbL) self-assembly approach to co-functionalize NCs with both Tob and AgNPs. LbL approaches have been used extensively in the field of drug delivery and nanoparticle functionalization, although predominantly with thin films and non-NC formulated polymeric particles.43–46 Commercially available 10 nm AgNPs were chosen for LbL functionalization of Tob-NCs, as we hypothesized that this size would allow for formation of a thin layer on the particle surfaces and have been previously shown to have improved antimicrobial activity when compared to AgNPs of larger size.16 Trimethyl chitosan (TMC) was chosen as the positively charged polyelectrolyte to facilitate LbL loading of AgNPs onto nanocomplexes (Figure 1a). TMC is a positively charged polysaccharide (Figure 1d), which is biocompatible and has mucoadhesive properties, making it particularly attractive for applications in both oral and pulmonary drug delivery.47–49 Additionally, TMC has been used in combination with DS to form nanocomplexes for use in drug delivery applications.48 TMC was first incubated with AgNPs at a mass ratio of 1:1 to initiate complexation and form positively charged AgNPs. An immediate color change was observed upon co-incubation, indicating successful displacement of citrate coatings with TMC. TMC-coated AgNPs were then added to Tob-NCs to form AgTob-NCs and additional TMC was added to stabilize the particles and prevent aggregation. Using this method at Na acetate pH 4, quantitative loading of AgNPs onto NCs was observed, with tunable mass ratios of Ag:Tob ranging from 1:2 to 1:8. A ratio of 1:2 Ag:Tob was chosen to maximize loading and subsequent synergistic antimicrobial activities. Interestingly, the immediate addition of AgNPs to freshly formed Tob-NCs led to a 50-100 nm decrease in particle diameter (Figure 2a, e). This phenomenon is likely due to the strong electrostatic attraction between TMC and DS, as has been observed previously.48 This strong complexation also led to an increase in overall Tob ee% for AgTob-NCs, increasing from 58% for Tob-NC 1c to >75% encapsulation efficiencies for all AgTob-NCs fabricated.

In addition to co-loading AgNPs and Tob onto a singular nanocarrier, we were interested in modulating the physicochemical properties of these NCs to design their biointerfacial interactions with bacterial biofilms. As Pseudomonas biofilms are composed of negatively charged biopolymers such as eDNA and alginate, we hypothesized that positively charged NCs of a 200-300 nm size regime could initiate interactive filtering within biofilms,8,42 with their size enabling steric diffusion through biofilm hydrogel pores while still allowing for electrostatic engagement with the biofilm matrix to increase NC attachment and antimicrobial delivery. To create positively charged AgTob-NCs, additional equivalents of TMC were added following AgNP co-incubation. These studies yielded two different NC formulations, AgTob-NC 2a bearing a negatively charged surface, and AgTob-NC 2b with a positively charged surface (Figure 2a, e). Both 2a and 2b had similar degrees of Tob ee%, with 2b being of slight increased size, likely owing to the additional TMC layers coating its surface.

2.3. Storage, Stability, and Biocompatibility of AgTob-NCs

AgTob-NCs 2a and 2b were evaluated for their long-term storage potential, stability in biological environments, and biocompatibility. Both NC 2a and 2b were able to be lyophilized and resuspended without significant aggregation or destabilization, although a slight increase in particle size to ∼300 nm in diameter was observed upon resuspension (Figure S2). To determine whether the NCs would destabilize or aggregate in biological media, NCs were incubated in 10% FBS for 20 h at 37 °C prior to characterization via DLS. NC 2a maintained its size and no aggregation was observed, while 2b increased in size to ∼1 μm (Figure S2), likely owing to modest aggregation of NCs through the adsorption of serum proteins onto the positively charged particle surfaces. However, for both NCs no large aggregation was visible by eye, indicating sufficient bio-stability. Presto Blue cell viability studies were performed using A549 lung cells incubated with AgNPs or NCs for 24 h. AgNPs can be cytotoxic at higher concentrations,50,51 however we observed only modest decreases in cell viability to ∼85% with AgNPs or NCs 2a and 2b at the highest dosage tested of 4 μg AgNP per 20,000 cells, with no significant differences measured between groups (Figure S3). Thus, AgTob-NCs demonstrated favorable properties for long-term storage, stability, and biocompatibility.

2.4. Antimicrobial Activity of AgTob-NCs Against Planktonic P. aeruginosa

With both NC formulations in hand, we set out to evaluate whether NC-mediated co-delivery of Ag and Tob provided improved antimicrobial activity against planktonic cultures of P. aeruginosa. Laboratory strain PA14 was used for all antimicrobial activity assays, as PA14 is a well-studied virulent PA strain and can be cultured to form robust biofilms.52–54 To evaluate the antimicrobial activities of NCs against planktonic PA14, tobramycin, AgNPs, and AgTob-NC 2a and 2b were cultured with dilute concentrations of PA for 20 h to determine the minimum inhibitory concentration (MIC) of tobramycin required to inhibit 80% of bacterial growth for each group relative to untreated PA14 cultures (Figure 3).

Figure 3.
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Figure 3.

Antimicrobial activity of AgTob-NCs against planktonic Pseudomonas aeruginosa cultures. PA14 laboratory strains were incubated with Tob, AgNPs+Tob, or AgTob-NC formulations for 20 h while shaking, prior to measuring bacterial growth at OD600. The minimum inhibitory concentration (MIC80) of tobramycin decreased from 8 μg/ml to 2 μg/ml with AgTob-NC treatment, demonstrating effective co-delivery and synergistic enhancement in antimicrobial activity.

Tobramycin alone had an MIC value of 8 μg/ml, which is in agreement with the range commonly reported in the literature for tobramycin bacteriostatic activity against PA.55,56 When coupled with AgNPs either co-incubated in solution (AgNP + Tob control) or co-loaded into NCs 2a and 2b, a significant enhancement in antimicrobial activity was observed, with Tob MIC values decreasing to 2 μg/ml (Figure 3). AgNPs alone had an MIC value of 4 μg/ml (data not shown), leading to a fractional inhibitory concentration (FIC) index value of 0.5, confirming synergistic activity as defined by FIC ≤ 0.5.57 No significant differences were observed between any of the Ag+Tob treatment groups. Thus, NCs 2a and 2b were able to deliver both antimicrobials effectively without sacrificing drug potency and enhanced the inhibition of planktonic P. aeruginosa growth when compared to Tob or AgNP treatments alone.

2.5. Antimicrobial Activities of AgTob-NCs Against P. aeruginosa Biofilms

As the majority of PA infections exist as biofilms and are associated with high rates of AMR, we next evaluated the antimicrobial activities of AgTob-NCs against PA14 biofilms. Biofilms were cultured using previously reported protocols54 for 24 h prior to the addition of therapeutics and further incubation for 20 h. PA14 biofilms were stained using a BacLight live/dead bacterial stain, with Syto9 (S9) acting as a universal stain for all bacteria and propidium iodide (PI) as a dead stain for bacteria with permeable membranes. PA14 grew into robust biofilms that displayed significant antimicrobial resistance to tobramycin, even at higher dosages of 40 μg/ml, corresponding to 6.4 μg of Tob per well (Figure 4a). AgNP treatment alone also demonstrated no observable antimicrobial or antibiofilm activities (Figure S4). Interestingly, Tob and AgNP individual treatments led to greater biofilm formation than untreated biofilm controls (Figure S4), which agrees with literature reports of sublethal antimicrobial concentrations enhancing biofilm growth.58,59 While dead bacteria were observed with Tob treatment, PI-stained bacteria were predominantly found outside of biofilm morphologies, indicating that while Tob may be effective against planktonic PA14, it was unable to penetrate through the biofilm hydrogels to achieve effective antimicrobial activity, as has been previously observed in literature reports.5,8,60

Figure 4.
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Figure 4.

Antibiofilm activities of AgTob-NCs. (a) Representative 3D projections of confocal fluorescence microscopy images of PA14 biofilms treated with Tob, AgTob-NC 2a, or AgTob-NC 2b. All biofilms were treated with 6.4 μg of Tob and/or 3.2 μg AgNP for 20 h. Syto9 (green) is a universal stain for both live and dead bacteria, while PI (magenta) stains only dead bacteria. White indicates overlay at approximately equal fluorescence intensities. Tobramycin alone did not demonstrate any significant antibiofilm activity with most dead bacteria observed outside of biofilm regions, while NC-mediated co-delivery of AgNPs and Tob was able to disrupt biofilm structures, with NC 2b demonstrating the most pronounced antibiofilm and bactericidal activities. Scale bars = 25 μm. Images obtained at 40× magnification. (b,c) Quantification of biofilm images to determine (b) biofilm biomass areas and (c) bacterial viability as measured through the ratio of S9/PI intensities within biofilms. Image quantification was performed using 20× magnification images. * p<0.05, *** p<0.001. Additional images of biofilms treated with all groups and controls at 20× magnification are available in the Supporting Information.

While neither tobramycin nor AgNP treatments alone could reduce biofilm formation or lead to significant reductions in bacterial viability, both AgTob-NCs 2a and 2b treatments led to observable disruptions in biofilm morphologies and significant reductions in bacterial biomass (Figure 4b). Images were quantified to determine the ratios of S9/PI fluorescence intensity as a marker for bacterial viability within biofilms. Only NC 2b led to a significant loss in bacterial viability within biofilms, with S9/PI ratios decreasing to ∼1.0, indicating that all the bacteria present within the biofilms were dead (Figure 4c). As the predominant difference between NC formulations was in the increased TMC coating and positive charge of NC 2b, it is therefore likely that the increased interactions between the positively charged TMC on NC 2b and the bacterial biofilm matrix led to enhanced biofilm disruption and antimicrobial activities. These studies therefore demonstrate the importance of drug carrier biointerface design, as these considerations can have significant effects on delivery efficiencies and therapeutic outcomes.

3. Conclusions

Rising rates of antimicrobial resistant bacterial biofilm infections coupled with a near-halt in the approval of new antibiotics have led to a global crisis and fears of entering a post-antibiotic era. It is therefore imperative to develop new drug carrier formulations capable of enhancing the activities of already-approved antibiotics such as tobramycin and other aminoglycosides. By combining polyelectrolyte nanocomplexation with layer-by-layer electrostatic self-assembly, we developed a new class of nanoscale drug carrier, capable of co-delivering tobramycin antibiotics with antimicrobial silver nanoparticles. These NCs enabled Tob and AgNPs to work together to enhance antimicrobial activity against planktonic P. aeruginosa cultures and overcome antimicrobial resistant PA biofilms. By engineering the physicochemical properties of the nanocomplexes, we observed how properties such as surface chemistry influence resultant particle biointerfaces and lead to enhanced antimicrobial activity and biofilm disruption. Overall, this approach shows promise in the co-delivery of diverse classes of antimicrobials to treat bacterial infections, including the resistant biofilms found within chronic wounds and cystic fibrosis lung infections.

4. Materials and Methods

4.1. General Methods and Instrumentation

Unless otherwise noted, all reagents were purchased from commercial sources. Low molecular weight trimethyl chitosan was purchased from Sigma Aldrich (St. Louis, MO) with a reported >70% degree of quaternization. 40 kDa Dextran sulfate was purchased from Sigma Aldrich (St. Louis, MO). All reagent solutions were freshly prepared for each experiment and fabrication process. Silver nanoparticles of 10 nm diameter were purchased from nanoComposix (San Diego, CA). Glycerol stocks of P. aeruginosa PA14 were generously provided by Dr. Oren Rosenberg. A549 lung cells were provided by the UCSF Cell and Genome Engineering Core.

Zeta potential and dynamic light scattering measurements were conducted on a Malvern Zetasizer Nano ZS. Absorbance and fluorescence quantification measurements were conducted on a Molecular Devices SpectraMax M5 plate reader. All fluorescence microscopy studies were conducted at the UCSF Nikon Imaging Center using a Nikon Ti spinning disk confocal microscope. Scanning Electron Microscopy (SEM) images were obtained at the UCSF Bioengineering & Biomaterials Correlative Imaging Core using a Zeiss Sigma 500 VP (Carl Zeiss Microscopy GmbH).

4.2. Tob-NC and AgTob-NC Fabrication

Tobramycin and dextran sulfate (DS) were prepared as 20 and 40 mg/mL solutions in ddH2O, respectively. NC formation was accomplished through stepwise addition of DS followed by Tob into a solution of 50 mM Na acetate pH 4 for a final concentration of 2 mg/mL Tob and variable concentrations of DS to achieve mass ratios ranging from 1:1 to 1:4 Tob:DS. The solution was mixed by pipetting and left to incubate for at least 5 min before any subsequent reactions or characterizations.

For all AgTob-NC formulations, Tob-NCs were first fabricated at a 1:3 Tob:DS mass ratio. AgTob-NCs were typically fabricated at a 300 μL scale. Prior to fabrication, TMC (7.5 μL of 4 mg/mL in Na acetate pH 4) and AgNPs (30 μL of 1 mg/mL stock solution obtained from commercial sources) were incubated together to achieve a 1:1 mass ratio. Next, a 75 μL solution of 0.05% (w/v) tween was prepared in ddH2O, to which were added Tob-NCs (30 μL, 2 mg/mL), followed by the TMC-AgNP solution (37.5 μL). Additional TMC was then added as a 45 μL solution in ddH2O (1 equiv for NC 2a, 3.5 equiv for NC 2b), followed by 60 μL of 5% (v/v) of poly(vinyl alcohol) and 52.5 μL ddH2O to obtain AgTob-NCs as a 300 μL solution at Tob and Ag concentrations of 200 μg/mL and 100 μg/mL, respectively. Tween was used to prevent NC aggregation, while PVA was incorporated to enable the lyophilization of NCs for long-term storage. AgTob-NCs were either used immediately or flash-frozen and lyophilized.

4.3. NC Characterization

Dynamic light scattering (DLS) and zeta potential measurements were conducted using a Malvern Zetasizer Nano ZS. NCs were typically analyzed at a Tob concentration of 50-100 μg/mL. Particle hydrodynamic diameters (Dh) were reported using Zavg measurements. Full DLS curves were obtained for intensity size distributions (Figure S2). Encapsulation efficiencies (ee%) for Tob were determined by analyzing the NC supernatants following centrifugation (13,000 rpm for 5 min) to evaluate drug depletion after NC formation and LbL AgNP loading. Centrifugation at this speed and time allowed for the formation of an NC pellet without pelleting AgNPs or Tob. AgNP depletion was analyzed via UV-Vis absorbance at 390 nm, while Tob depletion was assessed via an o-phthalaldehyde fluorescence assay.41 Briefly, o-phathalaldehyde was prepared as a 1 mg/mL solution in 100 mM Na borate pH 10.4 buffer with the addition of MeOH for 10% (v/v) and β-mercaptoethanol for 0.5% (v/v) final. o-Phthalaldehyde solutions (15 μL) were added to iPOH (90 μL) prior to the addition of sample supernatant (15 μL). Solutions were incubated for 20 min and then analyzed for fluorescence intensity (360/450 ex/em) and compared to Tob calibration curves. o-Phthalaldehyde stock solutions could be stored at 4 °C for 1-2 weeks without any observable loss in signal.

The morphology of the NC suspensions was determined using field emission scanning electron microscope (FE SEM), Zeiss Sigma 500 VP (Carl Zeiss Microscopy GmbH). Samples for electron microscopy were prepared by mounting droplets of NC suspensions (20 μL) onto carbon substrate-coated SEM stubs and allowed to air dry. Subsequently, samples were stained with Uranyless. The Uranyless droplet was placed on the hydrophobic surface (parafilm). The stubs with NCs’ side were placed on the Uranyless drop for 2 minutes and thereafter blotted by filter paper to remove access stain on the NCs. Followed by washing 3 times with ddH2O at room temperature. Finally, the samples were dried at room temperature for at least 12 h prior to analyze via FE SEM.

4.4. Mammalian Cell Culture and Biocompatibility Studies

A549 cells were cultured in F12 growth medium containing L-glutamine, supplemented with 10% fetal bovine serum and penicillin/streptomycin, and incubated at 37 °C and 5% CO2. For biocompatibility studies, A549 cells were trypsinized, resuspended to a concentration of 100,000 cells/mL, and plated in triplicate into a 96 well plate for a final cell number of 10,000 cells/well. After 24 h incubation, the media was removed and replaced with 200 μL of media + treatment (AgNP, AgTob-NC 2a, or AgTob-NC 2b). Treatments were prepared by fabricating the nanocomplexes as previously described at concentrations of 200 μg/mL Tob and 100 μg/mL Ag in a final volume of 300 μL. This was further diluted into A549 media for a final Ag concentration of 20 μg/mL, the highest concentration experimental condition. This was serially diluted 1:2 in A549 media until reaching 0.625 μg Ag/mL and added to the cells. The cells were then incubated for an additional 24 h. Following incubation, 20 μL of Presto Blue were added to each well. The cells were then incubated for 1 h and Presto Blue fluorescence intensity (ex/em 560/590) was measured to determine cell viabilities relative to untreated cells.

4.5. Planktonic P. aeruginosa Antimicrobial Activity Studies

PA14 was cultured overnight from frozen glycerol stocks at 37°C and 220 rpm in LB media. PA14 cultures were then refreshed by performing a 1:8 dilution into LB and shaken for an additional 1-3 h until an OD600 > 0.4 was achieved to confirm log-phase bacterial growth. PA14 was then plated into 96-well plates at 100 μL and OD600 = 0.002 in accordance with previously reported methods.61 Next, 100 μL of treatment groups and controls were added per well at 2x concentration to achieve PA14 OD600 = 0.001 and treatment concentrations starting at 8 μg/mL Tob and 4 μg/mL Ag with 1:2 serial dilutions to a final Tob concentration of 0.25 μg/mL. All antimicrobial studies were performed with a minimum of n=3 biological replicates. Plates were then incubated at 37°C and 220 rpm for 20 h prior to measurement of OD600 to assess bacterial viability relative to untreated controls. MIC values are defined as the minimum concentration of drug required to inhibit 80% bacterial growth relative to untreated controls.

4.6. P. aeruginosa Biofilm Studies

PA14 biofilms were grown using previously reported methods.54 PA14 overnight cultures were refreshed by performing a 1:8 dilution into LB and shaken for an additional 1-3 h until an OD600 > 0.4 was achieved to confirm log-phase bacterial growth. Bacteria were then plated into half-area well plates (Greiner Bio-One) at 100 μL and OD600 = 0.02 and sealed with air-permeable “Breathe-Easy” membranes. Plates were then placed into a stationary incubator with water bath and incubated at 37 °C for 24 h. After 24 h, the air-permeable membranes were removed, and treatment groups were added to biofilms at 4x concentrations and 40 μL per well. Next, 20 μL of BacLight dyes Syto9 and propidium iodide (co-incubated at 1:300 dilutions each from purchased stocks into PBS following manufacturer’s instructions) were added to each well. Care was taken to add solutions dropwise to the top of each well without disturbing the biofilm. After treatment and BacLight dye addition, plates were sealed with air-permeable membranes and incubated at 37 °C for 20 h with gentle rotations at 50 rpm. After 20 h, bacterial biofilms were imaged using confocal fluorescence microscopy, with S9 excited using a FITC channel and PI excited using a Cy3 channel. Images were acquired using both 20x and 40x air objectives. Images were acquired as z-stacks of biofilms, with 2 μm spacing and 50 μm total slices. Z-stacks were centered at the z-position of highest S9 fluorescence intensity and relative z-stacks were obtained ± 25 μm from that slice. All biofilm studies were performed with a minimum of n=3 biological replicates.

4.7. P. aeruginosa Biofilm Image Analysis and Quantification

Image quantification of biofilm area and viability was done through ImageJ. First, the background was subtracted from all images within a stack, based upon the z-slice that had the brightest S9 signal. A universal threshold value was applied to all images within a z-stack in order to segment biofilm mass from planktonic bacteria. This threshold was calculated based on Otsu’s binarization of the S9 channel in the untreated control biofilm. Within each segmented area of biomass, the average fluorescence intensities of S9 and PI were measured. This process was repeated for the 5 z-slices above and below the brightest S9 z-slice in a stack. Biofilm area, S9 fluorescence intensity, and PI fluorescence intensity were averaged from these 11 slices for each biofilm z-stack. Image analysis was conducted on z-stacks from 3 biological replicates and plotted as mean ± standard deviation. Statistical analysis was performed using one-way ANOVA with multiple comparisons (Tukey’s method).

Supporting Information

Figures S1-S4. SEM of Tob-NCs, AgTob-NC stability studies, Biocompatibility studies, Biofilm images at 20x magnification.

Acknowledgments

J.A.F. was supported by the UCSF HIVE postdoctoral fellowship. P.R. was supported by the National Science Foundation Graduate Research Fellowship and the NIH T32 Training Grant Program. M.A.Y. acknowledges support from the CFF LeRoy Matthews Award YU18L0. The authors acknowledge funding by the Cystic Fibrosis Foundation (Research Award #835526).

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Polyelectrolyte Nanocomplex Formation Combined with Electrostatic Self-Assembly Enables the Co-Delivery of Synergistic Antimicrobials to Treat Bacterial Biofilms
Joel A. Finbloom, Preethi Raghavan, Bhushan N. Kharbikar, Michelle A. Yu, Tejal A. Desai
bioRxiv 2021.11.22.469570; doi: https://doi.org/10.1101/2021.11.22.469570
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Polyelectrolyte Nanocomplex Formation Combined with Electrostatic Self-Assembly Enables the Co-Delivery of Synergistic Antimicrobials to Treat Bacterial Biofilms
Joel A. Finbloom, Preethi Raghavan, Bhushan N. Kharbikar, Michelle A. Yu, Tejal A. Desai
bioRxiv 2021.11.22.469570; doi: https://doi.org/10.1101/2021.11.22.469570

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