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An evolutionarily conserved cis-regulatory element of Nkx3.2 contributes to early jaw joint morphology in zebrafish

Jake Leyhr, Laura Waldmann, Beata Filipek-Górniok, Hanqing Zhang, Amin Allalou, View ORCID ProfileTatjana Haitina
doi: https://doi.org/10.1101/2021.11.26.470082
Jake Leyhr
1Subdepartment of Evolution and Development, Department of Organismal Biology, Uppsala University, 75236 Uppsala, Sweden
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Laura Waldmann
1Subdepartment of Evolution and Development, Department of Organismal Biology, Uppsala University, 75236 Uppsala, Sweden
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Beata Filipek-Górniok
2Science for Life Laboratory Genome Engineering Zebrafish Facility, Department of Organismal Biology, Uppsala University, 75236 Uppsala, Sweden
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Hanqing Zhang
3Division of Visual Information and Interaction, Department of Information Technology, Uppsala University, 75105 Uppsala, Sweden
4Science for Life Laboratory BioImage Informatics Facility, Uppsala, Sweden
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Amin Allalou
3Division of Visual Information and Interaction, Department of Information Technology, Uppsala University, 75105 Uppsala, Sweden
4Science for Life Laboratory BioImage Informatics Facility, Uppsala, Sweden
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Tatjana Haitina
1Subdepartment of Evolution and Development, Department of Organismal Biology, Uppsala University, 75236 Uppsala, Sweden
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  • ORCID record for Tatjana Haitina
  • For correspondence: [email protected]
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Abstract

The acquisition of movable jaws was a major event during vertebrate evolution. The role of NK3 homeobox 2 (Nkx3.2) transcription factor in patterning the primary jaw joint of gnathostomes (jawed vertebrates) is well known, however knowledge about its regulatory mechanism is lacking. In this study, we report a proximal enhancer element of Nkx3.2 that is deeply conserved in gnathostomes but undetectable in the jawless hagfish. This enhancer is active in the developing jaw joint region of the zebrafish Danio rerio, and was thus designated as jaw joint regulatory sequence 1 (JRS1). We further show that JRS1 enhancer sequences from a range of gnathostome species, including a chondrichthyan and mammals, have the same activity in the jaw joint as the native zebrafish enhancer, indicating a high degree of functional conservation despite the divergence of cartilaginous and bony fish lineages or the transition of the primary jaw joint into the middle ear of mammals. Finally, we show that deletion of JRS1 from the zebrafish genome using CRISPR/Cas9 leads to a transient jaw joint deformation and partial fusion. Emergence of this Nkx3.2 enhancer in early gnathostomes may have contributed to the origin and shaping of the articulating surfaces of vertebrate jaws.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted November 27, 2021.
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An evolutionarily conserved cis-regulatory element of Nkx3.2 contributes to early jaw joint morphology in zebrafish
Jake Leyhr, Laura Waldmann, Beata Filipek-Górniok, Hanqing Zhang, Amin Allalou, Tatjana Haitina
bioRxiv 2021.11.26.470082; doi: https://doi.org/10.1101/2021.11.26.470082
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An evolutionarily conserved cis-regulatory element of Nkx3.2 contributes to early jaw joint morphology in zebrafish
Jake Leyhr, Laura Waldmann, Beata Filipek-Górniok, Hanqing Zhang, Amin Allalou, Tatjana Haitina
bioRxiv 2021.11.26.470082; doi: https://doi.org/10.1101/2021.11.26.470082

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