High resolution species detection: accurate long read eDNA metabarcoding of North Sea fish using Oxford Nanopore sequencing

Karlijn Doorenspleet; Lara Jansen; Saskia Oosterbroek; Oscar Bos; Pauline Kamermans; Max Janse; Erik Wurz; Albertinka Murk; Reindert Nijland

doi:10.1101/2021.11.26.470087

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High resolution species detection: accurate long read eDNA metabarcoding of North Sea fish using Oxford Nanopore sequencing

View ORCID ProfileKarlijn Doorenspleet, Lara Jansen, Saskia Oosterbroek, View ORCID ProfileOscar Bos, Pauline Kamermans, View ORCID ProfileMax Janse, Erik Wurz, View ORCID ProfileAlbertinka Murk, View ORCID ProfileReindert Nijland

doi: https://doi.org/10.1101/2021.11.26.470087

Karlijn Doorenspleet

1Marine Animal Ecology group, Wageningen University and Research, P.O. Box 338, 6700 AH, Wageningen, The Netherlands

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ORCID record for Karlijn Doorenspleet

Lara Jansen

1Marine Animal Ecology group, Wageningen University and Research, P.O. Box 338, 6700 AH, Wageningen, The Netherlands

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Saskia Oosterbroek

1Marine Animal Ecology group, Wageningen University and Research, P.O. Box 338, 6700 AH, Wageningen, The Netherlands

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Oscar Bos

2Wageningen Marine Research, PO Box 57, 1780 AB Den Helder, The Netherlands

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Pauline Kamermans

1Marine Animal Ecology group, Wageningen University and Research, P.O. Box 338, 6700 AH, Wageningen, The Netherlands

3Wageningen Marine Research, PO Box 77, 4400 AB Yerseke, The Netherlands

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Max Janse

4Royal Burgers’ Zoo, Antoon van Hooffplein 1, 6816 SH Arnhem, The Netherlands

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Erik Wurz

1Marine Animal Ecology group, Wageningen University and Research, P.O. Box 338, 6700 AH, Wageningen, The Netherlands

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Albertinka Murk

1Marine Animal Ecology group, Wageningen University and Research, P.O. Box 338, 6700 AH, Wageningen, The Netherlands

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Reindert Nijland

1Marine Animal Ecology group, Wageningen University and Research, P.O. Box 338, 6700 AH, Wageningen, The Netherlands

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For correspondence: reindert.nijland@wur.nl

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Posted November 26, 2021.

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High resolution species detection: accurate long read eDNA metabarcoding of North Sea fish using Oxford Nanopore sequencing

Karlijn Doorenspleet, Lara Jansen, Saskia Oosterbroek, Oscar Bos, Pauline Kamermans, Max Janse, Erik Wurz, Albertinka Murk, Reindert Nijland

bioRxiv 2021.11.26.470087; doi: https://doi.org/10.1101/2021.11.26.470087

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High resolution species detection: accurate long read eDNA metabarcoding of North Sea fish using Oxford Nanopore sequencing

Karlijn Doorenspleet, Lara Jansen, Saskia Oosterbroek, Oscar Bos, Pauline Kamermans, Max Janse, Erik Wurz, Albertinka Murk, Reindert Nijland

bioRxiv 2021.11.26.470087; doi: https://doi.org/10.1101/2021.11.26.470087

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