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Awake mouse brain photoacoustic and optical imaging through a transparent ultrasound cranial window

View ORCID ProfileShubham Mirg, View ORCID ProfileHaoyang Chen, Kevin L. Turner, Jinyun Liu, Bruce J. Gluckman, View ORCID ProfilePatrick J. Drew, View ORCID ProfileSri-Rajasekhar Kothapalli
doi: https://doi.org/10.1101/2021.12.08.471795
Shubham Mirg
1Department of Biomedical Engineering, Pennsylvania State University, University Park, PA 16802, USA
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Haoyang Chen
1Department of Biomedical Engineering, Pennsylvania State University, University Park, PA 16802, USA
6Center for Neural Engineering, Pennsylvania State University, University Park, PA 16802, USA
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Kevin L. Turner
1Department of Biomedical Engineering, Pennsylvania State University, University Park, PA 16802, USA
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Jinyun Liu
1Department of Biomedical Engineering, Pennsylvania State University, University Park, PA 16802, USA
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Bruce J. Gluckman
1Department of Biomedical Engineering, Pennsylvania State University, University Park, PA 16802, USA
4Department of Engineering Science and Mechanics, Pennsylvania State University, University Park, PA 16802, USA
5Department of Neurosurgery, Pennsylvania State University, University Park, PA 16802, USA
6Center for Neural Engineering, Pennsylvania State University, University Park, PA 16802, USA
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Patrick J. Drew
1Department of Biomedical Engineering, Pennsylvania State University, University Park, PA 16802, USA
4Department of Engineering Science and Mechanics, Pennsylvania State University, University Park, PA 16802, USA
5Department of Neurosurgery, Pennsylvania State University, University Park, PA 16802, USA
6Center for Neural Engineering, Pennsylvania State University, University Park, PA 16802, USA
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Sri-Rajasekhar Kothapalli
1Department of Biomedical Engineering, Pennsylvania State University, University Park, PA 16802, USA
2Penn State Cancer Institute, Pennsylvania State University, Hershey, PA 17033, USA
3Graduate Program in Acoustics, Pennsylvania State University, University Park, PA 16802, USA
6Center for Neural Engineering, Pennsylvania State University, University Park, PA 16802, USA
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  • For correspondence: srkothapalli@psu.edu
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Abstract

Optical resolution photoacoustic microscopy (OR-PAM) can map the cerebral vasculature at capillary level resolution. However, the OR-PAM setup’s bulky imaging head makes awake mouse brain imaging challenging and inhibits its integration with other optical neuroimaging modalities. Moreover, the glass cranial windows used for optical microscopy are unsuitable for OR-PAM due to the acoustic impedance mismatch between the glass plate and the tissue. To overcome these challenges, we propose a lithium niobate based transparent ultrasound trans-ducer (TUT) as a cranial window on a thinned mouse skull. The TUT cranial window simplifies the imaging head considerably due to its dual functionality as an optical window and ultrasound transducer. The window remains stable for six weeks, with no noticeable inflammation and minimal bone regrowth. The TUT window’s potential is demonstrated by imaging the awake mouse cerebral vasculature using OR-PAM, intrinsic optical signal imaging and two-photon microscopy. The TUT cranial window can potentially also be used for ultrasound stimulation and simultaneous multimodal imaging of the awake mouse brain.

Competing Interest Statement

The authors have declared no competing interest.

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Posted December 10, 2021.
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Awake mouse brain photoacoustic and optical imaging through a transparent ultrasound cranial window
Shubham Mirg, Haoyang Chen, Kevin L. Turner, Jinyun Liu, Bruce J. Gluckman, Patrick J. Drew, Sri-Rajasekhar Kothapalli
bioRxiv 2021.12.08.471795; doi: https://doi.org/10.1101/2021.12.08.471795
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Awake mouse brain photoacoustic and optical imaging through a transparent ultrasound cranial window
Shubham Mirg, Haoyang Chen, Kevin L. Turner, Jinyun Liu, Bruce J. Gluckman, Patrick J. Drew, Sri-Rajasekhar Kothapalli
bioRxiv 2021.12.08.471795; doi: https://doi.org/10.1101/2021.12.08.471795

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