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Predicting proprioceptive cortical anatomy and neural coding with topographic autoencoders

View ORCID ProfileKyle P. Blum, View ORCID ProfileMax Grogan, Yufei Wu, View ORCID ProfileJ. Alex Harston, View ORCID ProfileLee E. Miller, View ORCID ProfileA. Aldo Faisal
doi: https://doi.org/10.1101/2021.12.10.472161
Kyle P. Blum
1Northwestern University
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Max Grogan
2Imperial College London
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Yufei Wu
2Imperial College London
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J. Alex Harston
2Imperial College London
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Lee E. Miller
1Northwestern University
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A. Aldo Faisal
2Imperial College London
3University of Bayreuth
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  • For correspondence: aldo.faisal@imperial.ac.uk
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Abstract

Proprioception is one of the least understood senses, yet fundamental for the control of movement. Even basic questions of how limb pose is represented in the somatosensory cortex are unclear. We developed a topographic variational autoencoder with lateral connectivity (topo-VAE) to compute a putative cortical map from a large set of natural movement data. Although not fitted to neural data, our model reproduces two sets of observations from monkey centre-out reaching: 1. The shape and velocity dependence of proprioceptive receptive fields in hand-centered coordinates despite the model having no knowledge of arm kinematics or hand coordinate systems. 2. The distribution of neuronal preferred directions (PDs) recorded from multi-electrode arrays. The model makes several testable predictions: 1. Encoding across the cortex has a blob-and-pinwheel-type geometry PDs. 2. Few neurons will encode just a single joint. Topo-VAE provides a principled basis for understanding of sensorimotor representations, and the theoretical basis of neural manifolds, with applications to the restoration of sensory feedback in brain-computer interfaces and the control of humanoid robots.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Refined model and provided a novel gradient estimation technique.

  • https://doi.org/10.6084/

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted August 27, 2022.
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Predicting proprioceptive cortical anatomy and neural coding with topographic autoencoders
Kyle P. Blum, Max Grogan, Yufei Wu, J. Alex Harston, Lee E. Miller, A. Aldo Faisal
bioRxiv 2021.12.10.472161; doi: https://doi.org/10.1101/2021.12.10.472161
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Predicting proprioceptive cortical anatomy and neural coding with topographic autoencoders
Kyle P. Blum, Max Grogan, Yufei Wu, J. Alex Harston, Lee E. Miller, A. Aldo Faisal
bioRxiv 2021.12.10.472161; doi: https://doi.org/10.1101/2021.12.10.472161

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