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CD90 is not constitutively expressed in functional innate lymphoid cells

View ORCID ProfileJ-H Schroeder, G Beattie, JW Lo, T Zabinski, RG Jenner, N Powell, View ORCID ProfileJ F Neves, GM Lord
doi: https://doi.org/10.1101/2021.12.11.472210
J-H Schroeder
1School of Immunology and Microbial Sciences, King’s College London, UK
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G Beattie
2CRUK City of London Centre Single Cell Genomics Facility, UCL Cancer Institute, University College London, UK
3Genomics Translational Technology Platform, UCL Cancer Institute, University College London, UK
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JW Lo
1School of Immunology and Microbial Sciences, King’s College London, UK
4Division of Digestive Diseases, Faculty of Medicine, Imperial College London, UK
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T Zabinski
1School of Immunology and Microbial Sciences, King’s College London, UK
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RG Jenner
5UCL Cancer Institute, University College London, UK
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N Powell
4Division of Digestive Diseases, Faculty of Medicine, Imperial College London, UK
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J F Neves
1School of Immunology and Microbial Sciences, King’s College London, UK
6Centre for Host-Microbiome Interactions, King’s College London, UK
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GM Lord
1School of Immunology and Microbial Sciences, King’s College London, UK
7School of Biological Sciences, Faculty of Biology, Medicine and Health, Division of Infection, Immunity and Respiratory Medicine, University of Manchester, UK
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  • For correspondence: graham.lord@manchester.ac.uk
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ABSTRACT

Huge progress has been made in understanding the biology of innate lymphoid cells (ILC) by adopting several well-known concepts in T cell biology. As such, flow cytometry gating strategies and markers, such as CD90, to identify ILC have been applied. Here, we report that most non-NK intestinal ILC have a high expression of CD90 as expected, but surprisingly a sub-population of cells exhibit low or even no expression of this marker. CD90-negative and CD90-low CD127+ ILC were present amongst all ILC subsets in the gut. The frequency of CD90-negative and CD90-low CD127+ ILC was dependent on stimulatory cues in vitro and enhanced due to dysbiosis in vivo. CD90-negative and CD90-low CD127+ ILC played a functional role as a source of IL-13, IFNγ and IL-17A at steady state and upon dysbiosis- and dextran sulphate sodium-elicited colitis. Hence, this study reveals that, contrary to expectations, CD90 is not constitutively expressed by functional ILC in the gut.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Conflict of interest statement The authors have declared that no conflict of interest exists.

  • Financial support: This study was supported by grants awarded by the Wellcome Trust (091009), the Medical Research Council (MR/M003493/1; MR/K002996/1, all to GML) and RCUK/UKRI Rutherford Fund fellowship (MR/R024812/1) to JFN. Research was also supported by the National Institute for Health Research (NIHR) Biomedical Research Centre at Guy’s and St Thomas and King’s College London. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR, or the Department of Health.

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Posted November 19, 2022.
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CD90 is not constitutively expressed in functional innate lymphoid cells
J-H Schroeder, G Beattie, JW Lo, T Zabinski, RG Jenner, N Powell, J F Neves, GM Lord
bioRxiv 2021.12.11.472210; doi: https://doi.org/10.1101/2021.12.11.472210
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CD90 is not constitutively expressed in functional innate lymphoid cells
J-H Schroeder, G Beattie, JW Lo, T Zabinski, RG Jenner, N Powell, J F Neves, GM Lord
bioRxiv 2021.12.11.472210; doi: https://doi.org/10.1101/2021.12.11.472210

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