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Translation rescue by targeting Ppp1r15a upstream open reading frame in vivo

Ashley Kidwell, Shiv Pratap Singh Yadav, Bernhard Maier, Amy Zollman, Kevin Ni, Arvin Halim, Danielle Janosevic, Jered Myslinski, Farooq Syed, Lifan Zeng, Alain Bopda Waffo, Kimihiko Banno, Xiaoling Xuei, Emma H. Doud, Pierre C. Dagher, View ORCID ProfileTakashi Hato
doi: https://doi.org/10.1101/2021.12.11.472232
Ashley Kidwell
1Department of Medicine, Indiana University School of Medicine
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Shiv Pratap Singh Yadav
1Department of Medicine, Indiana University School of Medicine
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Bernhard Maier
1Department of Medicine, Indiana University School of Medicine
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Amy Zollman
1Department of Medicine, Indiana University School of Medicine
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Kevin Ni
1Department of Medicine, Indiana University School of Medicine
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Arvin Halim
1Department of Medicine, Indiana University School of Medicine
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Danielle Janosevic
1Department of Medicine, Indiana University School of Medicine
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Jered Myslinski
1Department of Medicine, Indiana University School of Medicine
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Farooq Syed
2Department of Pediatrics and the Herman B. Wells Center, Indiana University School of Medicine
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Lifan Zeng
3Department of Biochemistry and Molecular Biology, Indiana University School of Medicine
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Alain Bopda Waffo
3Department of Biochemistry and Molecular Biology, Indiana University School of Medicine
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Kimihiko Banno
4Department of Physiology, Nara Medical University, Japan
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Xiaoling Xuei
5Department of Medical and Molecular Genetics, Indiana University School of Medicine
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Emma H. Doud
3Department of Biochemistry and Molecular Biology, Indiana University School of Medicine
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Pierre C. Dagher
1Department of Medicine, Indiana University School of Medicine
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Takashi Hato
1Department of Medicine, Indiana University School of Medicine
6Richard L. Roudebush Veterans Affairs Medical Center, Indianapolis
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  • ORCID record for Takashi Hato
  • For correspondence: thato@iu.edu
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Abstract

The eIF2 initiation complex is central to maintaining a functional translation machinery. Extreme stress such as life-threatening sepsis exposes vulnerabilities in this tightly regulated system, resulting in an imbalance between the opposing actions of kinases and phosphatases on the main regulatory subunit eIF2α. Here, we report that translation shutdown is a hallmark of established sepsis-induced kidney injury brought about by excessive eIF2α phosphorylation and sustained by blunted expression of the counterregulatory phosphatase subunit Ppp1r15a. We determined that the blunted Ppp1r15a expression persists because of the presence of an upstream open reading frame (uORF). Overcoming this barrier with genetic approaches enabled the derepression of Ppp1r15a, salvaged translation and improved kidney function in an endotoxemia model. We also found that the loss of this uORF has broad effects on the composition and phosphorylation status of the immunopeptidome that extended beyond the eIF2α axis. Collectively, our findings define the breath and potency of the highly conserved Ppp1r15a uORF and provide a paradigm for the design of uORF-based translation rheostat strategies. The ability to accurately control the dynamics of translation during sepsis will open new paths for the development of therapies at codon level precision.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Conflict of interest: The authors have declared that no conflict of interest exists.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 12, 2021.
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Translation rescue by targeting Ppp1r15a upstream open reading frame in vivo
Ashley Kidwell, Shiv Pratap Singh Yadav, Bernhard Maier, Amy Zollman, Kevin Ni, Arvin Halim, Danielle Janosevic, Jered Myslinski, Farooq Syed, Lifan Zeng, Alain Bopda Waffo, Kimihiko Banno, Xiaoling Xuei, Emma H. Doud, Pierre C. Dagher, Takashi Hato
bioRxiv 2021.12.11.472232; doi: https://doi.org/10.1101/2021.12.11.472232
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Translation rescue by targeting Ppp1r15a upstream open reading frame in vivo
Ashley Kidwell, Shiv Pratap Singh Yadav, Bernhard Maier, Amy Zollman, Kevin Ni, Arvin Halim, Danielle Janosevic, Jered Myslinski, Farooq Syed, Lifan Zeng, Alain Bopda Waffo, Kimihiko Banno, Xiaoling Xuei, Emma H. Doud, Pierre C. Dagher, Takashi Hato
bioRxiv 2021.12.11.472232; doi: https://doi.org/10.1101/2021.12.11.472232

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