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An infectious SARS-CoV-2 B.1.1.529 Omicron virus escapes neutralization by several therapeutic monoclonal antibodies

Laura A. VanBlargan, John M. Errico, Peter J. Halfmann, Seth J. Zost, View ORCID ProfileJames E. Crowe Jr., Lisa A. Purcell, Yoshihiro Kawaoka, Davide Corti, Daved H. Fremont, View ORCID ProfileMichael S. Diamond
doi: https://doi.org/10.1101/2021.12.15.472828
Laura A. VanBlargan
1Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA
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John M. Errico
2Department of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO, USA
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Peter J. Halfmann
3Influenza Research Institute, Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, WI, USA
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Seth J. Zost
4Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, USA
5Department of Pediatrics Vanderbilt University Medical Center, Nashville, TN, USA
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James E. Crowe Jr.
4Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, USA
5Department of Pediatrics Vanderbilt University Medical Center, Nashville, TN, USA
6Department of Pathology, and Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, TN, USA
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  • ORCID record for James E. Crowe Jr.
Lisa A. Purcell
7Vir Biotechnology, St Louis, MO, USA
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Yoshihiro Kawaoka
3Influenza Research Institute, Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, WI, USA
8Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, 108-8639 Tokyo, Japan
9The Research Center for Global Viral Diseases, National Center for Global Health and Medicine Research Institute, Tokyo 162-8655, Japan
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Davide Corti
10Humabs BioMed SA, a subsidiary of Vir Biotechnology, Bellinzona, Switzerland
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Daved H. Fremont
2Department of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO, USA
11Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO
12Department of Biochemistry & Molecular Biophysics, Washington University School of Medicine, St. Louis, MO
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Michael S. Diamond
1Department of Medicine, Washington University School of Medicine, St. Louis, MO, USA
2Department of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO, USA
11Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO
13Andrew M. and Jane M. Bursky Center for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, Saint Louis, MO
14Center for Vaccines and Immunity to Microbial Pathogens, Washington University School of Medicine, Saint Louis, MO
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  • ORCID record for Michael S. Diamond
  • For correspondence: mdiamond@wustl.edu
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ABSTRACT

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused the global COVID-19 pandemic resulting in millions of deaths worldwide. Despite the development and deployment of highly effective antibody and vaccine countermeasures, rapidly-spreading SARS-CoV-2 variants with mutations at key antigenic sites in the spike protein jeopardize their efficacy. Indeed, the recent emergence of the highly-transmissible B.1.1.529 Omicron variant is especially concerning because of the number of mutations, deletions, and insertions in the spike protein. Here, using a panel of anti-receptor binding domain (RBD) monoclonal antibodies (mAbs) corresponding to those with emergency use authorization (EUA) or in advanced clinical development by Vir Biotechnology (S309, the parent mAbs of VIR-7381), AstraZeneca (COV2-2196 and COV2-2130, the parent mAbs of AZD8895 and AZD1061), Regeneron (REGN10933 and REGN10987), Lilly (LY-CoV555 and LY-CoV016), and Celltrion (CT-P59), we report the impact on neutralization of a prevailing, infectious B.1.1.529 Omicron isolate compared to a historical WA1/2020 D614G strain. Several highly neutralizing mAbs (LY-CoV555, LY-CoV016, REGN10933, REGN10987, and CT-P59) completely lost inhibitory activity against B.1.1.529 virus in both Vero-TMPRSS2 and Vero-hACE2-TMPRSS2 cells, whereas others were reduced (∼12-fold decrease, COV2-2196 and COV2-2130 combination) or minimally affected (S309). Our results suggest that several, but not all, of the antibody products in clinical use will lose efficacy against the B.1.1.529 Omicron variant and related strains.

Competing Interest Statement

M.S.D. is a consultant for Inbios, Vir Biotechnology, Senda Bioscences, and Carnival Corporation, and on the Scientific Advisory Boards of Moderna and Immune. The Diamond laboratory has received funding from Moderna, Vir Biotechnology, and Emergent BioSolutions. J.E.C. has served as a consultant for Luna Biologics and Merck Sharp and Dohme Corp., is a member of the Scientific Advisory Boards of Meissa Vaccines, and is Founder of IDBiologics. The Crowe laboratory has received sponsored research agreements from Takeda Vaccines, AstraZeneca and IDBiologics. Vanderbilt University has applied for patents related to two antibodies in this paper. L.A.P. and D.C. are employees of Vir Biotechnology and may hold equity in Vir Biotechnology. L.A.P is a former employee and shareholder in Regeneron Pharmaceuticals.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 17, 2021.
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An infectious SARS-CoV-2 B.1.1.529 Omicron virus escapes neutralization by several therapeutic monoclonal antibodies
Laura A. VanBlargan, John M. Errico, Peter J. Halfmann, Seth J. Zost, James E. Crowe Jr., Lisa A. Purcell, Yoshihiro Kawaoka, Davide Corti, Daved H. Fremont, Michael S. Diamond
bioRxiv 2021.12.15.472828; doi: https://doi.org/10.1101/2021.12.15.472828
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An infectious SARS-CoV-2 B.1.1.529 Omicron virus escapes neutralization by several therapeutic monoclonal antibodies
Laura A. VanBlargan, John M. Errico, Peter J. Halfmann, Seth J. Zost, James E. Crowe Jr., Lisa A. Purcell, Yoshihiro Kawaoka, Davide Corti, Daved H. Fremont, Michael S. Diamond
bioRxiv 2021.12.15.472828; doi: https://doi.org/10.1101/2021.12.15.472828

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