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IFN-γ-independent control of M. tuberculosis requires CD4 T cell-derived GM-CSF and activation of HIF-1α

View ORCID ProfileErik Van Dis, Huntly M Morrison, Daniel M Fines, View ORCID ProfileJanet Peace Babirye, Lily H McCann, Sagar Rawal, View ORCID ProfileJeffery S Cox, View ORCID ProfileSarah A Stanley
doi: https://doi.org/10.1101/2021.12.16.473015
Erik Van Dis
aDepartment of Molecular and Cell Biology, Division of Immunology and Pathogenesis, University of California, Berkeley, Berkeley, California, USA
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Huntly M Morrison
aDepartment of Molecular and Cell Biology, Division of Immunology and Pathogenesis, University of California, Berkeley, Berkeley, California, USA
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Daniel M Fines
aDepartment of Molecular and Cell Biology, Division of Immunology and Pathogenesis, University of California, Berkeley, Berkeley, California, USA
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Janet Peace Babirye
aDepartment of Molecular and Cell Biology, Division of Immunology and Pathogenesis, University of California, Berkeley, Berkeley, California, USA
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Lily H McCann
bSchool of Public Health, Division of Infectious Diseases and Vaccinology, University of California, Berkeley, Berkeley, California, USA
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Sagar Rawal
bSchool of Public Health, Division of Infectious Diseases and Vaccinology, University of California, Berkeley, Berkeley, California, USA
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Jeffery S Cox
aDepartment of Molecular and Cell Biology, Division of Immunology and Pathogenesis, University of California, Berkeley, Berkeley, California, USA
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Sarah A Stanley
aDepartment of Molecular and Cell Biology, Division of Immunology and Pathogenesis, University of California, Berkeley, Berkeley, California, USA
bSchool of Public Health, Division of Infectious Diseases and Vaccinology, University of California, Berkeley, Berkeley, California, USA
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  • For correspondence: sastanley@berkeley.edu
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Abstract

The prevailing model of protective immunity to tuberculosis is that CD4 T cells produce the cytokine IFN-γ to activate bactericidal mechanisms in infected macrophages. Recent evidence has expanded this model, and it is now clear that CD4 T cells can control M. tuberculosis infection in the absence of IFN-γ production. To identify factors and pathways involved in IFN-γ-independent control, we developed a co-culture model using CD4 T cells isolated from the lungs of infected mice and M. tuberculosis-infected murine bone marrow-derived macrophages (BMDMs). We show that IFN-γ-independent control is primarily mediated by CD4 T cell production of the cytokine GM-CSF and requires activation of the macrophage transcription factor HIF-1α. HIF-1α activation drives a metabolic shift toward aerobic glycolysis and leads to the production of lipid droplets, both of which support host defense against infection. Surprisingly, recombinant GM-CSF is insufficient to rescue the absence of control by GM-CSF-deficient CD4 T cells during co-culture with BMDMs. In peritoneal macrophages, GM-CSF is sufficient to control growth, induces lipid droplet biogenesis, and requires HIF-1α expression for control. While HIF-1α-mediated control following IFN-γ stimulation requires nitric oxide, we find that HIF-1α activation by CD4 T cells and recombinant GM-CSF is nitric oxide-independent, implying a distinct pathway of activation. In addition to GM-CSF, CD4 T cells produce a factor that helps maintain phagosome membrane integrity during infection and blocks bacterial access to host lipids, a primary nutrient source. These results advance our understanding of CD4 T cell-mediated immunity to M. tuberculosis, clarify the role of nitric oxide as primarily immunomodulatory during M. tuberculosis infection, and reveal a novel mechanism for the activation of HIF-1α. Furthermore, we establish a previously unknown functional link between GM-CSF and HIF-1α and provide evidence that CD4 T cell-derived GM-CSF is a potent bactericidal effector.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted December 16, 2021.
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IFN-γ-independent control of M. tuberculosis requires CD4 T cell-derived GM-CSF and activation of HIF-1α
Erik Van Dis, Huntly M Morrison, Daniel M Fines, Janet Peace Babirye, Lily H McCann, Sagar Rawal, Jeffery S Cox, Sarah A Stanley
bioRxiv 2021.12.16.473015; doi: https://doi.org/10.1101/2021.12.16.473015
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IFN-γ-independent control of M. tuberculosis requires CD4 T cell-derived GM-CSF and activation of HIF-1α
Erik Van Dis, Huntly M Morrison, Daniel M Fines, Janet Peace Babirye, Lily H McCann, Sagar Rawal, Jeffery S Cox, Sarah A Stanley
bioRxiv 2021.12.16.473015; doi: https://doi.org/10.1101/2021.12.16.473015

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