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ORA47 is a transcriptional regulator of a general stress response hub

View ORCID ProfileLiping Zeng, Hao Chen, Yaqi Wang, Derrick Hicks, Haiyan Ke, Jose Pruneda-Paz, Katayoon Dehesh
doi: https://doi.org/10.1101/2021.12.20.473540
Liping Zeng
1Institute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521
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  • ORCID record for Liping Zeng
Hao Chen
1Institute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521
2Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
5Rice Research Institute, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China
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Yaqi Wang
1Institute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521
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Derrick Hicks
3Department of Plant Biology, University of California, Davis, CA 95616
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Haiyan Ke
1Institute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521
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Jose Pruneda-Paz
4Section of Cell and Developmental Biology, University of California, La Jolla, CA 92093
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Katayoon Dehesh
1Institute for Integrative Genome Biology and Department of Botany and Plant Sciences, University of California, Riverside, CA 92521
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  • For correspondence: kdehesh@ucr.edu
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Abstract

Transcriptional regulators of general stress response (GSR) reprogram expression of selected genes to transduce informational signals into cellular events, ultimately manifested in plant’s ability to cope with environmental challenges. Identification of the core GSR regulatory proteins will uncover the principal modules and their mode of action in the establishment of adaptive responses. To define the GSR regulatory components, we employed a yeast-one-hybrid assay to identify the protein(s) that binds to the previously established functional GSR motif, coined Rapid Stress Response Element (RSRE). This led to the isolation of ORA47 (octadecanoid-responsive AP2/ERF-domain transcription factor 47), a Methyl jasmonate (MeJA) inducible protein. Subsequently, the ORA47 transcriptional activity was confirmed using RSRE-driven Luciferase (LUC) activity assay performed in the ORA47 loss- and gain-of-function lines introgressed into the 4xRSRE::Luc background. In addition, the prime contribution of CALMODULIN-BINDING TRANSCRIPTIONAL ACTIVATOR3 (CAMTA3) protein in induction of RSRE was reaffirmed by genetic studies. Moreover, exogenous application of MeJA led to enhanced levels of ORA47 and CAMTA3 transcripts, and the induction of RSRE::LUC activity. Metabolic analyses illustrated the reciprocal functional inputs of ORA47 and CAMTA3 in increasing JA levels. Lastly, transient assays identified JASMONATE ZIM-domain1 (JAZ1) as a repressor of RSRE::LUC activity.

Collectively, the report provides a fresh insight into the initial mechanistic features of transducing the informational signals into adaptive responses in part via the complex functional interplay between JA biosynthesis/signaling cascade and the transcriptional reprogramming necessary for potentiation of GSR, while offering a window into the role of intraorganellar communication in the establishment of adaptive responses.

Significance The work unmasks the initial mechanistic features of adaptive responses that include tight cooperativity between JA biosynthesis and signaling cascade and the nuclear transcriptional machinery comprised of two activators (CAMTA3 and ORA47) and a suppressor JAZ1). The work further identifies CAMTA3 as a functional link between JA signaling and activation of a general stress transcriptional hub.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted December 21, 2021.
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ORA47 is a transcriptional regulator of a general stress response hub
Liping Zeng, Hao Chen, Yaqi Wang, Derrick Hicks, Haiyan Ke, Jose Pruneda-Paz, Katayoon Dehesh
bioRxiv 2021.12.20.473540; doi: https://doi.org/10.1101/2021.12.20.473540
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ORA47 is a transcriptional regulator of a general stress response hub
Liping Zeng, Hao Chen, Yaqi Wang, Derrick Hicks, Haiyan Ke, Jose Pruneda-Paz, Katayoon Dehesh
bioRxiv 2021.12.20.473540; doi: https://doi.org/10.1101/2021.12.20.473540

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