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Image-based taxonomic classification of bulk biodiversity samples using deep learning and domain adaptation

View ORCID ProfileTomochika Fujisawa, View ORCID ProfileVíctor Noguerales, View ORCID ProfileEmmanouil Meramveliotakis, View ORCID ProfileAnna Papadopoulou, View ORCID ProfileAlfried P. Vogler
doi: https://doi.org/10.1101/2021.12.22.473797
Tomochika Fujisawa
1The Center for Data Science Education and Research, Shiga University, 1-1-1 Banba, Hikone, Shiga 522-8522, Japan
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  • For correspondence: t.fujisawa05@gmail.com victor.noguerales@csic.es
Víctor Noguerales
2Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia 1678, Cyprus
3Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), Astrofísico Francisco Sánchez 3, 38206, San Cristóbal de La Laguna, Tenerife, Canary Islands, Spain
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  • For correspondence: t.fujisawa05@gmail.com victor.noguerales@csic.es
Emmanouil Meramveliotakis
2Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia 1678, Cyprus
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Anna Papadopoulou
2Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia 1678, Cyprus
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Alfried P. Vogler
4Department of Life Sciences, Natural History Museum, Cromwell Rd, London, SW7 5BD, UK
5Department of Life Sciences, Silwood Park Campus, Imperial College London, Ascot, SL5 7PY, UK
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Article Information

doi 
https://doi.org/10.1101/2021.12.22.473797
History 
  • December 23, 2021.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Tomochika Fujisawa1,#,*,
  2. Víctor Noguerales2,3,#,*,
  3. Emmanouil Meramveliotakis2,
  4. Anna Papadopoulou2 and
  5. Alfried P. Vogler4,5
  1. 1The Center for Data Science Education and Research, Shiga University, 1-1-1 Banba, Hikone, Shiga 522-8522, Japan
  2. 2Department of Biological Sciences, University of Cyprus, PO Box 20537, Nicosia 1678, Cyprus
  3. 3Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), Astrofísico Francisco Sánchez 3, 38206, San Cristóbal de La Laguna, Tenerife, Canary Islands, Spain
  4. 4Department of Life Sciences, Natural History Museum, Cromwell Rd, London, SW7 5BD, UK
  5. 5Department of Life Sciences, Silwood Park Campus, Imperial College London, Ascot, SL5 7PY, UK
  1. ↵*Corresponding authors: Tomochika Fujisawa, t.fujisawa05{at}gmail.com, Víctor Noguerales, victor.noguerales{at}csic.es
  1. ↵# These authors equally contributed to this work

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Posted December 23, 2021.
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Image-based taxonomic classification of bulk biodiversity samples using deep learning and domain adaptation
Tomochika Fujisawa, Víctor Noguerales, Emmanouil Meramveliotakis, Anna Papadopoulou, Alfried P. Vogler
bioRxiv 2021.12.22.473797; doi: https://doi.org/10.1101/2021.12.22.473797
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Image-based taxonomic classification of bulk biodiversity samples using deep learning and domain adaptation
Tomochika Fujisawa, Víctor Noguerales, Emmanouil Meramveliotakis, Anna Papadopoulou, Alfried P. Vogler
bioRxiv 2021.12.22.473797; doi: https://doi.org/10.1101/2021.12.22.473797

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