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Interplay between LHCSR proteins and state transitions governs the NPQ response in intact cells of Chlamydomonas during light fluctuations

View ORCID ProfileCollin J. Steen, View ORCID ProfileAdrien Burlacot, View ORCID ProfileAudrey H. Short, View ORCID ProfileKrishna K. Niyogi, View ORCID ProfileGraham R. Fleming
doi: https://doi.org/10.1101/2021.12.31.474662
Collin J. Steen
1Department of Chemistry, University of California, Berkeley, CA 94720, USA
2Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
3Kavli Energy Nanoscience Institute, Berkeley, CA 94720, USA
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  • ORCID record for Collin J. Steen
Adrien Burlacot
4Howard Hughes Medical Institute, University of California, Berkeley, CA 94720, USA
5Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720 USA
6Department of Plant Biology, Carnegie Institution for Science, Stanford, CA, 94305, USA
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Audrey H. Short
2Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
3Kavli Energy Nanoscience Institute, Berkeley, CA 94720, USA
7Graduate Group in Biophysics University of California, Berkeley, CA 94720, USA
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Krishna K. Niyogi
2Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
4Howard Hughes Medical Institute, University of California, Berkeley, CA 94720, USA
5Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720 USA
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  • For correspondence: niyogi@berkeley.edu fleming@berkeley.edu
Graham R. Fleming
1Department of Chemistry, University of California, Berkeley, CA 94720, USA
2Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
3Kavli Energy Nanoscience Institute, Berkeley, CA 94720, USA
7Graduate Group in Biophysics University of California, Berkeley, CA 94720, USA
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  • For correspondence: niyogi@berkeley.edu fleming@berkeley.edu
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Abstract

Photosynthetic organisms use sunlight as the primary energy source to fix CO2. However, in the environment, light energy fluctuates rapidly and often exceeds saturating levels for periods ranging from seconds to hours, which can lead to detrimental effects for cells. Safe dissipation of excess light energy occurs primarily by non-photochemical quenching (NPQ) processes. In the model green microalga Chlamydomonas reinhardtii, photoprotective NPQ is mostly mediated by pH-sensing light-harvesting complex stress-related (LHCSR) proteins and the redistribution of light-harvesting antenna proteins between the photosystems (state transition). Although each component underlying NPQ has been documented, their relative contributions to the dynamic functioning of NPQ under fluctuating light conditions remains unknown. Here, by monitoring NPQ throughout multiple high light-dark cycles with fluctuation periods ranging from 1 to 10 minutes, we show that the dynamics of NPQ depend on the frequency of light fluctuations. Mutants impaired in the accumulation of LHCSRs (npq4, lhcsr1, and npq4lhcsr1) showed significantly less quenching during illumination, demonstrating that LHCSR proteins are responsible for the majority of NPQ during repetitive exposure to high light fluctuations. Activation of NPQ was also observed during the dark phases of light fluctuations, and this was exacerbated in mutants lacking LHCSRs. By analyzing 77K chlorophyll fluorescence spectra and chlorophyll fluorescence lifetimes and yields in a mutant impaired in state transition, we show that this phenomenon arises from state transition. Finally, we quantified the contributions of LHCSRs and state transition to the overall NPQ amplitude and dynamics for all light periods tested and compared those with cell growth under various periods of fluctuating light. These results highlight the dynamic functioning of photoprotection under light fluctuations and open a new way to systematically characterize the photosynthetic response to an ever-changing light environment.

One sentence summary The roles of LHCSR and STT7 in NPQ vary with the light fluctuation period and duration of light fluctuation.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • To fix a conversion problem on Figure 7

  • List of abbreviations

    NPQ
    non-photochemical quenching
    qE
    energy-dependent quenching
    qT
    state transitions
    qI
    photoinhibition
    qZ
    zeaxanthin-dependent quenching
    PAM
    pulse-amplitude modulation
    TCSPC
    time-correlated single photon counting
    LHCSR
    light-harvesting stress related protein
    STT7
    serine/threonine-protein kinase
    LHC
    light-harvesting complex
    PS
    photosystem
    CCM
    CO2 concentration mechanism
    Ci
    inorganic carbon (CO2, HCO3−, CO32-)
    HL
    high light
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    Posted January 02, 2022.
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    Interplay between LHCSR proteins and state transitions governs the NPQ response in intact cells of Chlamydomonas during light fluctuations
    Collin J. Steen, Adrien Burlacot, Audrey H. Short, Krishna K. Niyogi, Graham R. Fleming
    bioRxiv 2021.12.31.474662; doi: https://doi.org/10.1101/2021.12.31.474662
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    Interplay between LHCSR proteins and state transitions governs the NPQ response in intact cells of Chlamydomonas during light fluctuations
    Collin J. Steen, Adrien Burlacot, Audrey H. Short, Krishna K. Niyogi, Graham R. Fleming
    bioRxiv 2021.12.31.474662; doi: https://doi.org/10.1101/2021.12.31.474662

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