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ClusTrast: a short read de novo transcript isoform assembler guided by clustered contigs

View ORCID ProfileKarl Johan Westrin, View ORCID ProfileWarren W. Kretzschmar, View ORCID ProfileOlof Emanuelsson
doi: https://doi.org/10.1101/2022.01.02.473666
Karl Johan Westrin
1Science for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, SE-171 65, Solna, Sweden
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Warren W. Kretzschmar
1Science for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, SE-171 65, Solna, Sweden
2Center for Hematology and Regenerative Medicine (HERM), Department of Medicine Huddinge, Karolinska Institute, SE-141 52, Flemingsberg, Sweden
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Olof Emanuelsson
1Science for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, SE-171 65, Solna, Sweden
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  • ORCID record for Olof Emanuelsson
  • For correspondence: olofem@kth.se
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Article Information

doi 
https://doi.org/10.1101/2022.01.02.473666
History 
  • November 22, 2022.

Article Versions

  • Version 1 (January 3, 2022 - 14:00).
  • You are viewing Version 2, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Karl Johan Westrin1,
  2. Warren W. Kretzschmar1,2 and
  3. Olof Emanuelsson1,*
  1. 1Science for Life Laboratory, Department of Gene Technology, KTH Royal Institute of Technology, SE-171 65, Solna, Sweden
  2. 2Center for Hematology and Regenerative Medicine (HERM), Department of Medicine Huddinge, Karolinska Institute, SE-141 52, Flemingsberg, Sweden
  1. ↵*Corresponding author; email: olofem{at}kth.se
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Posted November 22, 2022.
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ClusTrast: a short read de novo transcript isoform assembler guided by clustered contigs
Karl Johan Westrin, Warren W. Kretzschmar, Olof Emanuelsson
bioRxiv 2022.01.02.473666; doi: https://doi.org/10.1101/2022.01.02.473666
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ClusTrast: a short read de novo transcript isoform assembler guided by clustered contigs
Karl Johan Westrin, Warren W. Kretzschmar, Olof Emanuelsson
bioRxiv 2022.01.02.473666; doi: https://doi.org/10.1101/2022.01.02.473666

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