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Investigation of the Effects of N-Linked Glycans on the Stability of the Spike Protein in SARS-CoV-2 by Molecular Dynamics Simulations

View ORCID ProfileE.Deniz Tekin
doi: https://doi.org/10.1101/2022.01.07.475397
E.Deniz Tekin
Computer Engineering Department, University of Turkish Aeronautical Association, Ankara 06990, Turkey
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  • For correspondence: edtekin@thk.edu.tr
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Abstract

We perform all-atom molecular dynamics simulations to study the effects of the N-linked glycans on the stability of the spike glycoprotein in SARS-CoV-2. After a 100 ns of simulation on the spike proteins without and with the N-linked glycans, we found that the presence of glycans increases the local stability in their vicinity; even though their effect on the full structure is negligible.

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Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted January 12, 2022.
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Investigation of the Effects of N-Linked Glycans on the Stability of the Spike Protein in SARS-CoV-2 by Molecular Dynamics Simulations
E.Deniz Tekin
bioRxiv 2022.01.07.475397; doi: https://doi.org/10.1101/2022.01.07.475397
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Investigation of the Effects of N-Linked Glycans on the Stability of the Spike Protein in SARS-CoV-2 by Molecular Dynamics Simulations
E.Deniz Tekin
bioRxiv 2022.01.07.475397; doi: https://doi.org/10.1101/2022.01.07.475397

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