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Automation of tree-ring detection and measurements using deep learning

View ORCID ProfileMiroslav Poláček, Alexis Arizpe, Patrick Hüther, Lisa Weidlich, Sonja Steindl, View ORCID ProfileKelly Swarts
doi: https://doi.org/10.1101/2022.01.10.475709
Miroslav Poláček
1Gregor Mendel Institute, Austrian Academy of Sciences, Dr. Bohr-Gasse 3, 1030, Vienna, Austria
2Department of Forest Ecology, Faculty of Forestry and Wood Sciences, Czech University of Life Sciences, Kamýcká 129,165 00, Prague, Czech Republic
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  • ORCID record for Miroslav Poláček
  • For correspondence: kelly.swarts@gmi.oeaw.ac.at
Alexis Arizpe
1Gregor Mendel Institute, Austrian Academy of Sciences, Dr. Bohr-Gasse 3, 1030, Vienna, Austria
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Patrick Hüther
1Gregor Mendel Institute, Austrian Academy of Sciences, Dr. Bohr-Gasse 3, 1030, Vienna, Austria
3Faculty of Biology, Ludwig-Maximilians-University Munich, 82152 Martinsried, Germany
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Lisa Weidlich
1Gregor Mendel Institute, Austrian Academy of Sciences, Dr. Bohr-Gasse 3, 1030, Vienna, Austria
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Sonja Steindl
1Gregor Mendel Institute, Austrian Academy of Sciences, Dr. Bohr-Gasse 3, 1030, Vienna, Austria
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Kelly Swarts
1Gregor Mendel Institute, Austrian Academy of Sciences, Dr. Bohr-Gasse 3, 1030, Vienna, Austria
4Max Perutz Labs, Department of Structural and Computational Biology, University of Vienna, Campus-Vienna-Biocenter 5, 1030, Vienna, Austria
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  • ORCID record for Kelly Swarts
  • For correspondence: kelly.swarts@gmi.oeaw.ac.at
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Article Information

doi 
https://doi.org/10.1101/2022.01.10.475709
History 
  • January 12, 2022.

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  • You are currently viewing Version 1 of this article (January 12, 2022 - 15:06).
  • View Version 2, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.

Author Information

  1. Miroslav Poláček1,2,*,
  2. Alexis Arizpe1,
  3. Patrick Hüther1,3,
  4. Lisa Weidlich1,
  5. Sonja Steindl1 and
  6. Kelly Swarts1,4,*
  1. 1Gregor Mendel Institute, Austrian Academy of Sciences, Dr. Bohr-Gasse 3, 1030, Vienna, Austria
  2. 2Department of Forest Ecology, Faculty of Forestry and Wood Sciences, Czech University of Life Sciences, Kamýcká 129,165 00, Prague, Czech Republic
  3. 3Faculty of Biology, Ludwig-Maximilians-University Munich, 82152 Martinsried, Germany
  4. 4Max Perutz Labs, Department of Structural and Computational Biology, University of Vienna, Campus-Vienna-Biocenter 5, 1030, Vienna, Austria
  1. ↵*co-corresponding; kelly.swarts{at}gmi.oeaw.ac.at
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Posted January 12, 2022.
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Automation of tree-ring detection and measurements using deep learning
Miroslav Poláček, Alexis Arizpe, Patrick Hüther, Lisa Weidlich, Sonja Steindl, Kelly Swarts
bioRxiv 2022.01.10.475709; doi: https://doi.org/10.1101/2022.01.10.475709
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Automation of tree-ring detection and measurements using deep learning
Miroslav Poláček, Alexis Arizpe, Patrick Hüther, Lisa Weidlich, Sonja Steindl, Kelly Swarts
bioRxiv 2022.01.10.475709; doi: https://doi.org/10.1101/2022.01.10.475709

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