Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Systematic analysis of human antibody response to ebolavirus glycoprotein reveals high prevalence of neutralizing public clonotypes

Elaine C. Chen, Pavlo Gilchuk, Seth J. Zost, Philipp A. Ilinykh, Elad Binshtein, Kai Huang, Luke Myers, Stefano Bonissone, Samuel Day, Chandrahaas R. Kona, Andrew Trivette, Joseph X. Reidy, Rachel E. Sutton, Christopher Gainza, Summer Monroig, Edgar Davidson, Erica Ollmann Saphire, Benjamin J. Doranz, Natalie Castellana, Alexander Bukreyev, View ORCID ProfileRobert H. Carnahan, View ORCID ProfileJames E. Crowe Jr
doi: https://doi.org/10.1101/2022.01.12.476089
Elaine C. Chen
1Department of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN, 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Pavlo Gilchuk
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Seth J. Zost
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Philipp A. Ilinykh
3Galveston National Laboratory, Galveston, TX 77550, USA
4Department of Pathology, University of Texas Medical Branch, Galveston, TX 77555, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Elad Binshtein
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Kai Huang
3Galveston National Laboratory, Galveston, TX 77550, USA
4Department of Pathology, University of Texas Medical Branch, Galveston, TX 77555, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Luke Myers
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Stefano Bonissone
5Abterra Biosciences, San Diego, CA 92109, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Samuel Day
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Chandrahaas R. Kona
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Andrew Trivette
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Joseph X. Reidy
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Rachel E. Sutton
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Christopher Gainza
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Summer Monroig
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Edgar Davidson
6Integral Molecular, Inc., Philadelphia, PA, 19104, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Erica Ollmann Saphire
7Department of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037, USA
8La Jolla Institute for Immunology, La Jolla, CA 92037, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Benjamin J. Doranz
6Integral Molecular, Inc., Philadelphia, PA, 19104, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Natalie Castellana
5Abterra Biosciences, San Diego, CA 92109, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Alexander Bukreyev
3Galveston National Laboratory, Galveston, TX 77550, USA
4Department of Pathology, University of Texas Medical Branch, Galveston, TX 77555, USA
9Department of Microbiology and Immunology, University of Texas Medical Branch, Galveston, TX 77555, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Robert H. Carnahan
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
10Department of Pediatrics, Vanderbilt University Medical Center, Nashville, TN, 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Robert H. Carnahan
James E. Crowe Jr
2Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN 37232, USA
10Department of Pediatrics, Vanderbilt University Medical Center, Nashville, TN, 37232, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for James E. Crowe Jr
  • For correspondence: james.crowe@vumc.org
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

SUMMARY

Understanding the human antibody response to emerging viral pathogens is key to epidemic preparedness. As the size of the B cell response to a pathogenic virus protective antigen is undefined, we performed deep paired heavy and light chain sequencing in EBOV-GP specific memory B cells, allowing analysis of the ebolavirus-specific antibody repertoire both genetically and functionally. This approach facilitated investigation of the molecular and genetic basis for evolution of cross-reactive antibodies by elucidating germline-encoded properties of antibodies to EBOV and identification of the overlap between antibodies in the memory B-cell and serum repertoire. We identified 73 public clonotypes to EBOV, 20% of which encoded antibodies with neutralization activity and capacity to protect in vivo. This comprehensive analysis of the public and private antibody repertoire provides insight into the molecular basis of the humoral immune response to EBOV-GP, which informs vaccine design of new vaccines and improved therapeutics.

Competing Interest Statement

E.D. and B.J.D. are employees of Integral Molecular, and B.J.D.is a shareholder in that company. J.E.C. has served as a consultant for Eli Lilly, GlaxoSmithKline and Luna Biologics, is a member of the Scientific Advisory Board of Meissa Vaccines and is Founder of IDBiologics. The Crowe laboratory has received funding support in sponsored research agreements from AstraZeneca, IDBiologics, and Takeda. All other authors declare no competing interests.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted January 13, 2022.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Systematic analysis of human antibody response to ebolavirus glycoprotein reveals high prevalence of neutralizing public clonotypes
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Systematic analysis of human antibody response to ebolavirus glycoprotein reveals high prevalence of neutralizing public clonotypes
Elaine C. Chen, Pavlo Gilchuk, Seth J. Zost, Philipp A. Ilinykh, Elad Binshtein, Kai Huang, Luke Myers, Stefano Bonissone, Samuel Day, Chandrahaas R. Kona, Andrew Trivette, Joseph X. Reidy, Rachel E. Sutton, Christopher Gainza, Summer Monroig, Edgar Davidson, Erica Ollmann Saphire, Benjamin J. Doranz, Natalie Castellana, Alexander Bukreyev, Robert H. Carnahan, James E. Crowe Jr
bioRxiv 2022.01.12.476089; doi: https://doi.org/10.1101/2022.01.12.476089
Digg logo Reddit logo Twitter logo Facebook logo Google logo LinkedIn logo Mendeley logo
Citation Tools
Systematic analysis of human antibody response to ebolavirus glycoprotein reveals high prevalence of neutralizing public clonotypes
Elaine C. Chen, Pavlo Gilchuk, Seth J. Zost, Philipp A. Ilinykh, Elad Binshtein, Kai Huang, Luke Myers, Stefano Bonissone, Samuel Day, Chandrahaas R. Kona, Andrew Trivette, Joseph X. Reidy, Rachel E. Sutton, Christopher Gainza, Summer Monroig, Edgar Davidson, Erica Ollmann Saphire, Benjamin J. Doranz, Natalie Castellana, Alexander Bukreyev, Robert H. Carnahan, James E. Crowe Jr
bioRxiv 2022.01.12.476089; doi: https://doi.org/10.1101/2022.01.12.476089

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Immunology
Subject Areas
All Articles
  • Animal Behavior and Cognition (3497)
  • Biochemistry (7341)
  • Bioengineering (5318)
  • Bioinformatics (20249)
  • Biophysics (10000)
  • Cancer Biology (7734)
  • Cell Biology (11291)
  • Clinical Trials (138)
  • Developmental Biology (6431)
  • Ecology (9943)
  • Epidemiology (2065)
  • Evolutionary Biology (13312)
  • Genetics (9358)
  • Genomics (12575)
  • Immunology (7696)
  • Microbiology (18999)
  • Molecular Biology (7432)
  • Neuroscience (40972)
  • Paleontology (300)
  • Pathology (1228)
  • Pharmacology and Toxicology (2133)
  • Physiology (3155)
  • Plant Biology (6857)
  • Scientific Communication and Education (1272)
  • Synthetic Biology (1895)
  • Systems Biology (5309)
  • Zoology (1087)