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Live-cell fluorescence lifetime multiplexing using synthetic fluorescent probes

View ORCID ProfileMichelle S. Frei, View ORCID ProfileBirgit Koch, View ORCID ProfileJulien Hiblot, View ORCID ProfileKai Johnsson
doi: https://doi.org/10.1101/2022.01.15.476486
Michelle S. Frei
1Department of Chemical Biology, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
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  • For correspondence: johnsson@mr.mpg.de
Birgit Koch
1Department of Chemical Biology, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
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Julien Hiblot
1Department of Chemical Biology, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
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Kai Johnsson
1Department of Chemical Biology, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120 Heidelberg, Germany
2Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland
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  • For correspondence: johnsson@mr.mpg.de
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Abstract

Fluorescence lifetime multiplexing requires fluorescent probes with distinct fluorescence lifetimes but similar spectral properties. Even though synthetic probes for many cellular targets are available for multicolor live-cell fluorescence microscopy, few of them have been characterized for their use in fluorescence lifetime multiplexing. Here we demonstrate that from a panel of 18 synthetic probes, eight pairwise combinations are suitable for fluorescence lifetime multiplexing in living mammalian cell lines. Moreover, combining multiple pairs in different spectral channels enables us to image up to six different biological targets, effectively doubling the number of observable targets. The combination of synthetic probes with fluorescence lifetime multiplexing is thus a powerful approach for live-cell imaging.

Competing Interest Statement

K.J. is inventor on patents filed by MPG and EPFL on fluorophores and labeling technologies. K.J. is cofounder of Spirochrome S.A. The remaining authors declare no competing interests.

Footnotes

  • Supplemental files were updated. Minor typos in the main text were adjusted.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted January 18, 2022.
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Live-cell fluorescence lifetime multiplexing using synthetic fluorescent probes
Michelle S. Frei, Birgit Koch, Julien Hiblot, Kai Johnsson
bioRxiv 2022.01.15.476486; doi: https://doi.org/10.1101/2022.01.15.476486
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Live-cell fluorescence lifetime multiplexing using synthetic fluorescent probes
Michelle S. Frei, Birgit Koch, Julien Hiblot, Kai Johnsson
bioRxiv 2022.01.15.476486; doi: https://doi.org/10.1101/2022.01.15.476486

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