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Differential UBE2H-CTLH E2-E3 ubiquitylation modules regulate erythroid maturation

View ORCID ProfileDawafuti Sherpa, Judith Müller, Özge Karayel, View ORCID ProfileJakub Chrustowicz, Peng Xu, Karthik V. Gottemukkala, Christine Baumann, Annette Gross, Oliver Czarnezki, Wei Zhang, Jun Gu, Johan Nilvebrant, Mitchell J. Weiss, Sachdev S. Sidhu, View ORCID ProfilePeter J. Murray, Matthias Mann, Brenda A. Schulman, Arno F. Alpi
doi: https://doi.org/10.1101/2022.01.18.476717
Dawafuti Sherpa
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
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  • ORCID record for Dawafuti Sherpa
Judith Müller
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
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Özge Karayel
2Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany
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Jakub Chrustowicz
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
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Peng Xu
3Hematology Center, Cyrus Tang Medical Institute, Soochow University, Suzhou, China
4Department of Hematology, St. Jude Children’s Research Hospital, Memphis, TN, USA
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Karthik V. Gottemukkala
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
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Christine Baumann
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
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Annette Gross
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
7Department of Immunoregulation, Max Planck Institute of Biochemistry, Martinsried, Germany
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Oliver Czarnezki
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
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Wei Zhang
5Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Canada
6Department of Molecular Genetics, University of Toronto, Toronto, Canada
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Jun Gu
5Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Canada
6Department of Molecular Genetics, University of Toronto, Toronto, Canada
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Johan Nilvebrant
5Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Canada
6Department of Molecular Genetics, University of Toronto, Toronto, Canada
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Mitchell J. Weiss
4Department of Hematology, St. Jude Children’s Research Hospital, Memphis, TN, USA
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Sachdev S. Sidhu
5Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Canada
6Department of Molecular Genetics, University of Toronto, Toronto, Canada
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Peter J. Murray
7Department of Immunoregulation, Max Planck Institute of Biochemistry, Martinsried, Germany
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Matthias Mann
2Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany
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Brenda A. Schulman
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
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Arno F. Alpi
1Department of Molecular Machines and Signaling, Max Planck Institute of Biochemistry, Martinsried, Germany
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  • For correspondence: aalpi@biochem.mpg.de
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Abstract

The development of haematopoietic stem cells into mature erythrocytes – erythropoiesis – is a controlled process characterized by cellular reorganisation and drastic reshaping of the proteome landscape. Failure of ordered erythropoiesis is associated with anaemias and haematological malignancies. Although the ubiquitin (UB) system is a known crucial post-translational regulator in erythropoiesis, how the erythrocyte is reshaped by the UB system is poorly understood. By measuring the proteomic landscape of in vitro human erythropoiesis models, we found dynamic differential expression of subunits of the CTLH E3 ubiquitin ligase complex that formed distinct maturation stage-dependent assemblies of structurally homologous RANBP9-and RANBP10-CTLH complexes. Moreover, protein abundance of CTLH’s cognate E2-conjugating enzyme UBE2H increased during terminal differentiation, which depended on catalytically active CTLH E3 complexes. CRISPR-Cas9 mediated inactivation of all CTLH E3 assemblies by targeting the catalytic subunit MAEA, or UBE2H, triggered spontaneous and accelerated maturation of erythroid progenitor cells including increased heme and haemoglobin synthesis. Thus, the orderly progression of human erythropoiesis is controlled by the assembly of distinct UBE2H-CTLH modules functioning at different developmental stages.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted January 18, 2022.
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Differential UBE2H-CTLH E2-E3 ubiquitylation modules regulate erythroid maturation
Dawafuti Sherpa, Judith Müller, Özge Karayel, Jakub Chrustowicz, Peng Xu, Karthik V. Gottemukkala, Christine Baumann, Annette Gross, Oliver Czarnezki, Wei Zhang, Jun Gu, Johan Nilvebrant, Mitchell J. Weiss, Sachdev S. Sidhu, Peter J. Murray, Matthias Mann, Brenda A. Schulman, Arno F. Alpi
bioRxiv 2022.01.18.476717; doi: https://doi.org/10.1101/2022.01.18.476717
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Differential UBE2H-CTLH E2-E3 ubiquitylation modules regulate erythroid maturation
Dawafuti Sherpa, Judith Müller, Özge Karayel, Jakub Chrustowicz, Peng Xu, Karthik V. Gottemukkala, Christine Baumann, Annette Gross, Oliver Czarnezki, Wei Zhang, Jun Gu, Johan Nilvebrant, Mitchell J. Weiss, Sachdev S. Sidhu, Peter J. Murray, Matthias Mann, Brenda A. Schulman, Arno F. Alpi
bioRxiv 2022.01.18.476717; doi: https://doi.org/10.1101/2022.01.18.476717

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