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A local translation program regulates centriole amplification in the airway epithelium

Helu Liu, Huijun Li, Zhihua Jiang, Shibo Jin, Rui Song, Ying Yang, Jun Li, Jingshu Huang, Xiaoqing Zhang, Xuesong Dong, View ORCID ProfileMunemasa Mori, View ORCID ProfileMarvin J Fritzler, Lin He, Wellington Cardoso, Jining Lu
doi: https://doi.org/10.1101/2022.01.18.476821
Helu Liu
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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Huijun Li
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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Zhihua Jiang
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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Shibo Jin
2Division of Cellular and Developmental Biology, Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, California, USA
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Rui Song
2Division of Cellular and Developmental Biology, Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, California, USA
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Ying Yang
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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Jun Li
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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Jingshu Huang
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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Xiaoqing Zhang
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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Xuesong Dong
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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Munemasa Mori
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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  • ORCID record for Munemasa Mori
Marvin J Fritzler
3Department of Biochemistry and Molecular Biology, Faculty of Medicine, University of Calgary, Canada
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  • ORCID record for Marvin J Fritzler
Lin He
2Division of Cellular and Developmental Biology, Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, California, USA
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Wellington Cardoso
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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  • For correspondence: wvc2104@cumc.columbia.edu jining.lu@nih.gov
Jining Lu
1The Columbia Center for Human Development, Division of Pulmonary, Allergy & Critical Care Medicine, Department of Medicine, Columbia University, College of Physicians & Surgeons, New York, New York, United States of America
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  • For correspondence: wvc2104@cumc.columbia.edu jining.lu@nih.gov
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Abstract

Biogenesis of organelles requires targeting of a subset of proteins to specific subcellular domains by signal peptides or mechanisms controlling mRNA localization and local translation. How local distribution and translation of specific mRNAs for organelle biogenesis is achieved remains elusive and likely to be dependent on the cellular context. Here we identify Trinucleotide repeat containing-6a (Tnrc6a), a component of the miRNA pathway, distinctively localized to apical granules of differentiating airway multiciliated cells (MCCs) adjacent to centrioles. In spite of being enriched in TNRC6A and the miRNA-binding protein AGO2, they lack enzymes for mRNA degradation. Instead, we found these apical granules enriched in components of the mRNA translation machinery and newly synthesized proteins suggesting that they are specific hubs for target mRNA localization and local translation in MCCs. Consistent with this, Tnrc6a loss of function prevented formation of these granules and led to a broad reduction, rather than stabilization of miRNA targets. These included downregulation of key genes involved in ciliogenesis and was associated with defective multicilia formation both in vivo and in primary airway epithelial cultures. Similar analysis of Tnrc6a disruption in yolk sac showed stabilization of miRNA targets, highlighting the potential diversity of these mechanisms across organs.

Highlights

  1. Tnrc6a is expressed in the lung selectively in differentiating multiciliated cells (MCC) adjacent to centrioles.

  2. TNRC6A localizes to apical granules containing AGO2, miRNAs and their targets, but lacking mRNA degradation enzymes.

  3. TNRC6A granules are enriched in components of the mRNA translation machinery and show evidence of concentrated newly-synthesized proteins

  4. Loss of Tnrc6a in the lung leads to reduction, not stabilization of miRNA targets.

  5. Tnrc6a is required for efficient centriole amplification and multicilia formation.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Reviewers' comments have been incorporated. Figures, Supplementary Figures and text have been revised for clarity.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted January 12, 2023.
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A local translation program regulates centriole amplification in the airway epithelium
Helu Liu, Huijun Li, Zhihua Jiang, Shibo Jin, Rui Song, Ying Yang, Jun Li, Jingshu Huang, Xiaoqing Zhang, Xuesong Dong, Munemasa Mori, Marvin J Fritzler, Lin He, Wellington Cardoso, Jining Lu
bioRxiv 2022.01.18.476821; doi: https://doi.org/10.1101/2022.01.18.476821
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A local translation program regulates centriole amplification in the airway epithelium
Helu Liu, Huijun Li, Zhihua Jiang, Shibo Jin, Rui Song, Ying Yang, Jun Li, Jingshu Huang, Xiaoqing Zhang, Xuesong Dong, Munemasa Mori, Marvin J Fritzler, Lin He, Wellington Cardoso, Jining Lu
bioRxiv 2022.01.18.476821; doi: https://doi.org/10.1101/2022.01.18.476821

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