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Microglia integration into human midbrain organoids leads to increased neuronal maturation and functionality

Sonia Sabate-Soler, Sarah Louise Nickels, Cláudia Saraiva, Emanuel Berger, Ugne Dubonyte, Kyriaki Barmpa, Yan Jun Lan, Tsukasa Kouno, Javier Jarazo, Graham Robertson, Jafar Sharif, Haruhiko Koseki, Christian Thome, Jay W. Shin, Sally A. Cowley, View ORCID ProfileJens C. Schwamborn
doi: https://doi.org/10.1101/2022.01.21.477192
Sonia Sabate-Soler
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
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Sarah Louise Nickels
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
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Cláudia Saraiva
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
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Emanuel Berger
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
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Ugne Dubonyte
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
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Kyriaki Barmpa
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
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Yan Jun Lan
3RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan
4ETH Zurich, Institute of Pharmaceutical Sciences, Zurich 8057 Switzerland
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Tsukasa Kouno
3RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan
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Javier Jarazo
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
2OrganoTherapeutics SARL-S, Esch-sur-Alzette, Luxembourg
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Graham Robertson
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
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Jafar Sharif
3RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan
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Haruhiko Koseki
3RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan
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Christian Thome
5Institute of Physiology and Pathophysiology, Heidelberg University, Heidelberg, Germany
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Jay W. Shin
3RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan
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Sally A. Cowley
6Oxford Parkinson’s Disease Centre, James Martin Stem Cell Facility, Sir William Dunn School of Pathology, University of Oxford, Oxford, UK.
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Jens C. Schwamborn
1Luxembourg Centre for Systems Biomedicine (LCSB), Developmental and Cellular Biology, University of Luxembourg, Belvaux, Luxembourg
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  • ORCID record for Jens C. Schwamborn
  • For correspondence: jens.schwamborn@uni.lu
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Abstract

The human brain is a complex, three-dimensional structure. To better recapitulate brain complexity, recent efforts have focused on the development of human specific midbrain organoids. Human iPSC-derived midbrain organoids consist of differentiated and functional neurons, which contain active synapses, as well as astrocytes and oligodendrocytes. However, the absence of microglia, with their ability to remodel neuronal networks and phagocytose apoptotic cells and debris, represents a major disadvantage for the current midbrain organoid systems. Additionally, neuro-inflammation related disease modeling is not possible in the absence of microglia. So far, no studies about the effects of human iPSC-derived microglia on midbrain organoid neural cells have been published. Here we describe an approach to derive microglia from human iPSCs and integrate them into iPSC-derived midbrain organoids. Using single nuclear RNA Sequencing, we provide a detailed characterization of microglia in midbrain organoids as well as the influence of their presence on the other cells of the organoids. Furthermore, we describe the effects that microglia have on cell death and oxidative stress- related gene expression. Finally, we show that microglia in midbrain organoids affect synaptic remodeling and increase neuronal excitability. Altogether, we show a more suitable system to further investigate brain development, as well as neurodegenerative diseases and neuro- inflammation.

Main Points

  • – Macrophage precursors can be efficiently co-cultured with midbrain organoids, they integrate into the tissue and differentiate into microglia in 3D.

  • – Organoids containing microglia have a smaller size and show a down-regulation of oxidative stress-related genes.

  • – Organoids co-cultured with microglia show differences in genes related to synaptic remodeling and action potential, as well as a more spontaneous action potential firing.

Competing Interest Statement

JCS and JJ are co-founders and shareholder of the biotech company Organo Therapeutics SARL. This company used midbrain organoids and assembloids for in vitro disease modeling and drug discovery.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted January 22, 2022.
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Microglia integration into human midbrain organoids leads to increased neuronal maturation and functionality
Sonia Sabate-Soler, Sarah Louise Nickels, Cláudia Saraiva, Emanuel Berger, Ugne Dubonyte, Kyriaki Barmpa, Yan Jun Lan, Tsukasa Kouno, Javier Jarazo, Graham Robertson, Jafar Sharif, Haruhiko Koseki, Christian Thome, Jay W. Shin, Sally A. Cowley, Jens C. Schwamborn
bioRxiv 2022.01.21.477192; doi: https://doi.org/10.1101/2022.01.21.477192
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Microglia integration into human midbrain organoids leads to increased neuronal maturation and functionality
Sonia Sabate-Soler, Sarah Louise Nickels, Cláudia Saraiva, Emanuel Berger, Ugne Dubonyte, Kyriaki Barmpa, Yan Jun Lan, Tsukasa Kouno, Javier Jarazo, Graham Robertson, Jafar Sharif, Haruhiko Koseki, Christian Thome, Jay W. Shin, Sally A. Cowley, Jens C. Schwamborn
bioRxiv 2022.01.21.477192; doi: https://doi.org/10.1101/2022.01.21.477192

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