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A phenotype-based forward genetic screen identifies Dnajb6 as a sick sinus syndrome gene

Yonghe Ding, Di Lang, Jianhua Yan, Haisong Bu, Hongsong Li, Kunli Jiao, Jingchun Yang, Tai Le, Karl J. Clark, Stephen C. Ekker, Hung Cao, Yuji Zhang, Yigang Li, Alexey V. Glukhov, View ORCID ProfileXiaolei Xu
doi: https://doi.org/10.1101/2022.01.25.477752
Yonghe Ding
1Department of Biochemistry and Molecular Biology, Department of Cardiovascular Medicine, Mayo Clinic, Rochester, MN, USA
2The Affiliated Hospital of Qingdao University & The Biomedical Sciences Institute of Qingdao University (Qingdao Branch of SJTU Bio-X Institutes), Qingdao University, Qingdao, China
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Di Lang
3Department of Medicine, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA
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Jianhua Yan
1Department of Biochemistry and Molecular Biology, Department of Cardiovascular Medicine, Mayo Clinic, Rochester, MN, USA
4Division of Cardiology, Xinhua Hospital Affiliated to Shanghai Jiaotong University School Of Medicine, Shanghai, China
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Haisong Bu
1Department of Biochemistry and Molecular Biology, Department of Cardiovascular Medicine, Mayo Clinic, Rochester, MN, USA
5Department of Cardiothoracic Surgery, Xiangya Hospital, Central South University, Changsha, China
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Hongsong Li
1Department of Biochemistry and Molecular Biology, Department of Cardiovascular Medicine, Mayo Clinic, Rochester, MN, USA
6Department of Cardiovascular Medicine, Jiading District Central Hospital Affiliated Shanghai University of Medicine & Health Science, Shanghai, China
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Kunli Jiao
1Department of Biochemistry and Molecular Biology, Department of Cardiovascular Medicine, Mayo Clinic, Rochester, MN, USA
4Division of Cardiology, Xinhua Hospital Affiliated to Shanghai Jiaotong University School Of Medicine, Shanghai, China
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Jingchun Yang
1Department of Biochemistry and Molecular Biology, Department of Cardiovascular Medicine, Mayo Clinic, Rochester, MN, USA
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Tai Le
7Department of Electrical Engineering and Computer Science, University of California Irvine, Irvine, CA, USA
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Karl J. Clark
8Department of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN, USA
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Stephen C. Ekker
8Department of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN, USA
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Hung Cao
7Department of Electrical Engineering and Computer Science, University of California Irvine, Irvine, CA, USA
9Department of Biomedical Engineering, University of California Irvine, Irvine, CA, USA
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Yuji Zhang
10Department of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, Maryland, USA
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Yigang Li
4Division of Cardiology, Xinhua Hospital Affiliated to Shanghai Jiaotong University School Of Medicine, Shanghai, China
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Alexey V. Glukhov
3Department of Medicine, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA
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Xiaolei Xu
1Department of Biochemistry and Molecular Biology, Department of Cardiovascular Medicine, Mayo Clinic, Rochester, MN, USA
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  • ORCID record for Xiaolei Xu
  • For correspondence: xu.xiaolei@mayo.edu
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Abstract

Sick sinus syndrome (SSS) is a group of heart rhythm disorders caused by malfunction of the sinus node, the heart’s primary pacemaker. Partially owing to its aging-associated phenotypic manifestation and low expressivity, molecular mechanisms of SSS remain difficult to decipher. Here, we aim to develop a phenotype-based forward genetic approach in the zebrafish (Danio rerio) animal model for discovering essential genes which dysfunction could result in SSS-like phenotypes. Previously we showed the generation of protein trap library by using a revertible gene-breaking transposon (GBT)-based insertional mutagenesis system. Here, we reported the generation of a collection of 35 zebrafish insertional cardiac lines derived from this protein trap library, which was screened using electrocardiographic measurements. As a result, three mutants with SSS-like phenotypes were identified. We then focused on one of these 3 GBT mutants called GBT411 in which dnajb6b gene was disrupted, and conducted expressional, genetic, transcriptome, and electrophysiological studies using both zebrafish and mouse models. These studies confirmed the identity of Dnajb6 as a novel SSS causative gene with a unique expression pattern within the specialized population of sinus node pacemaker cardiomyocytes that lack the expression of HCN4 channels. Together, this study demonstrates the feasibility of a genetic screening approach in an adult vertebrate animal model for discovering new genetic factors for a heart rhythm disorder such as SSS.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted January 26, 2022.
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A phenotype-based forward genetic screen identifies Dnajb6 as a sick sinus syndrome gene
Yonghe Ding, Di Lang, Jianhua Yan, Haisong Bu, Hongsong Li, Kunli Jiao, Jingchun Yang, Tai Le, Karl J. Clark, Stephen C. Ekker, Hung Cao, Yuji Zhang, Yigang Li, Alexey V. Glukhov, Xiaolei Xu
bioRxiv 2022.01.25.477752; doi: https://doi.org/10.1101/2022.01.25.477752
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A phenotype-based forward genetic screen identifies Dnajb6 as a sick sinus syndrome gene
Yonghe Ding, Di Lang, Jianhua Yan, Haisong Bu, Hongsong Li, Kunli Jiao, Jingchun Yang, Tai Le, Karl J. Clark, Stephen C. Ekker, Hung Cao, Yuji Zhang, Yigang Li, Alexey V. Glukhov, Xiaolei Xu
bioRxiv 2022.01.25.477752; doi: https://doi.org/10.1101/2022.01.25.477752

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