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Omicron-specific mRNA vaccine induced potent neutralizing antibody against Omicron but not other SARS-CoV-2 variants

View ORCID ProfileI-Jung Lee, Cheng-Pu Sun, Ping-Yi Wu, Yu-Hua Lan, I-Hsuan Wang, Wen-Chun Liu, Sheng-Che Tseng, Szu-I Tsung, Yu-Chi Chou, Monika Kumari, Yu-Wei Chang, Hui-Feng Chen, Yin-Shiou Lin, Tsung-Yen Chen, Chi-Wen Chiu, Chung-Hsuan Hsieh, Cheng-Ying Chuang, Chih-Chao Lin, Chao-Min Cheng, Hsiu-Ting Lin, Wan-Yu Chen, Po-Cheng Chiang, Chong-Chou Lee, James C. Liao, Han-Chung Wu, Mi-Hua Tao
doi: https://doi.org/10.1101/2022.01.31.478406
I-Jung Lee
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
2Graduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan
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  • ORCID record for I-Jung Lee
Cheng-Pu Sun
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
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Ping-Yi Wu
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
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Yu-Hua Lan
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
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I-Hsuan Wang
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
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Wen-Chun Liu
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Sheng-Che Tseng
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
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Szu-I Tsung
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
2Graduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan
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Yu-Chi Chou
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Monika Kumari
4Institute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan
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Yu-Wei Chang
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Hui-Feng Chen
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Yin-Shiou Lin
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Tsung-Yen Chen
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Chi-Wen Chiu
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
5Department of Clinical Laboratory Science and Medical Biotechnology, National Taiwan University, Taipei, Taiwan
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Chung-Hsuan Hsieh
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
5Department of Clinical Laboratory Science and Medical Biotechnology, National Taiwan University, Taipei, Taiwan
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Cheng-Ying Chuang
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
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Chih-Chao Lin
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Chao-Min Cheng
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Hsiu-Ting Lin
4Institute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan
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Wan-Yu Chen
4Institute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan
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Po-Cheng Chiang
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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Chong-Chou Lee
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
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James C. Liao
6Institute of Biological Chemistry, Academia Sinica, Taipei, Taiwan
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Han-Chung Wu
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
4Institute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan
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Mi-Hua Tao
1Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan
2Graduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan
3Biomedical Translation Research Center, Academia Sinica, Taipei, Taiwan
5Department of Clinical Laboratory Science and Medical Biotechnology, National Taiwan University, Taipei, Taiwan
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  • For correspondence: bmtao@ibms.sinica.edu.tw
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Abstract

The emerging SARS-CoV-2 variants of concern (VOC) harbor mutations associated with increasing transmission and immune escape, hence undermine the effectiveness of current COVID-19 vaccines. In late November of 2021, the Omicron (B.1.1.529) variant was identified in South Africa and rapidly spread across the globe. It was shown to exhibit significant resistance to neutralization by serum not only from convalescent patients, but also from individuals receiving currently used COVID-19 vaccines with multiple booster shots. Therefore, there is an urgent need to develop next generation vaccines against VOCs like Omicron. In this study, we develop a panel of mRNA-LNP-based vaccines using the receptor binding domain (RBD) of Omicron and Delta variants, which are dominant in the current wave of COVID-19. In addition to the Omicron- and Delta-specific vaccines, the panel also includes a “Hybrid” vaccine that uses the RBD containing all 16 point-mutations shown in Omicron and Delta RBD, as well as a bivalent vaccine composed of both Omicron and Delta RBD-LNP in half dose. Interestingly, both Omicron-specific and Hybrid RBD-LNP elicited extremely high titer of neutralizing antibody against Omicron itself, but few to none neutralizing antibody against other SARS-CoV-2 variants. The bivalent RBD-LNP, on the other hand, generated antibody with broadly neutralizing activity against the wild-type virus and all variants. Surprisingly, similar cross-protection was also shown by the Delta-specific RBD-LNP. Taken together, our data demonstrated that Omicron-specific mRNA vaccine can induce potent neutralizing antibody response against Omicron, but the inclusion of epitopes from other variants may be required for eliciting cross-protection. This study would lay a foundation for rational development of the next generation vaccines against SARS-CoV-2 VOCs.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted January 31, 2022.
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Omicron-specific mRNA vaccine induced potent neutralizing antibody against Omicron but not other SARS-CoV-2 variants
I-Jung Lee, Cheng-Pu Sun, Ping-Yi Wu, Yu-Hua Lan, I-Hsuan Wang, Wen-Chun Liu, Sheng-Che Tseng, Szu-I Tsung, Yu-Chi Chou, Monika Kumari, Yu-Wei Chang, Hui-Feng Chen, Yin-Shiou Lin, Tsung-Yen Chen, Chi-Wen Chiu, Chung-Hsuan Hsieh, Cheng-Ying Chuang, Chih-Chao Lin, Chao-Min Cheng, Hsiu-Ting Lin, Wan-Yu Chen, Po-Cheng Chiang, Chong-Chou Lee, James C. Liao, Han-Chung Wu, Mi-Hua Tao
bioRxiv 2022.01.31.478406; doi: https://doi.org/10.1101/2022.01.31.478406
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Omicron-specific mRNA vaccine induced potent neutralizing antibody against Omicron but not other SARS-CoV-2 variants
I-Jung Lee, Cheng-Pu Sun, Ping-Yi Wu, Yu-Hua Lan, I-Hsuan Wang, Wen-Chun Liu, Sheng-Che Tseng, Szu-I Tsung, Yu-Chi Chou, Monika Kumari, Yu-Wei Chang, Hui-Feng Chen, Yin-Shiou Lin, Tsung-Yen Chen, Chi-Wen Chiu, Chung-Hsuan Hsieh, Cheng-Ying Chuang, Chih-Chao Lin, Chao-Min Cheng, Hsiu-Ting Lin, Wan-Yu Chen, Po-Cheng Chiang, Chong-Chou Lee, James C. Liao, Han-Chung Wu, Mi-Hua Tao
bioRxiv 2022.01.31.478406; doi: https://doi.org/10.1101/2022.01.31.478406

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