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A mitochondrial blood-based patient stratification candidate biomarker for Parkinson’s disease

Rui Qi, View ORCID ProfileEsther Sammler, Claudia P. Gonzalez-Hunt, Nicholas Pena, Jeremy P. Rouanet, Steven Goodson, Marie Fuzatti, Fabio Blandini, Kirk I. Erickson, Andrea M. Weinstein, Shalini Padmanabhan, Fox BioNet (FBN) investigators, Francesca Tonelli, Dario R. Alessi, Sruti Shiva, Laurie H. Sanders
doi: https://doi.org/10.1101/2022.02.07.479309
Rui Qi
1Departments of Neurology and Pathology, Duke University School of Medicine, Durham, NC, 27710
2Duke Center for Neurodegeneration and Neurotherapeutics, Duke University, Durham, North Carolina
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Esther Sammler
3Molecular and Clinical Medicine, Ninewells Hospital and Medical School, University of Dundee, Dundee, DD1 9SY, UK
4Medical Research Council Protein Phosphorylation and Ubiquitylation Unit, University of Dundee, Dundee, DD1 5EH, UK
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  • ORCID record for Esther Sammler
Claudia P. Gonzalez-Hunt
1Departments of Neurology and Pathology, Duke University School of Medicine, Durham, NC, 27710
2Duke Center for Neurodegeneration and Neurotherapeutics, Duke University, Durham, North Carolina
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Nicholas Pena
1Departments of Neurology and Pathology, Duke University School of Medicine, Durham, NC, 27710
2Duke Center for Neurodegeneration and Neurotherapeutics, Duke University, Durham, North Carolina
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Jeremy P. Rouanet
1Departments of Neurology and Pathology, Duke University School of Medicine, Durham, NC, 27710
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Steven Goodson
1Departments of Neurology and Pathology, Duke University School of Medicine, Durham, NC, 27710
2Duke Center for Neurodegeneration and Neurotherapeutics, Duke University, Durham, North Carolina
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Marie Fuzatti
5IRCCS Mondino Foundation, National Institute of Neurology; Department of Brain and Behavioral Sciences, University of Pavia
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Fabio Blandini
5IRCCS Mondino Foundation, National Institute of Neurology; Department of Brain and Behavioral Sciences, University of Pavia
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Kirk I. Erickson
6Department of Psychology, University of Pittsburgh, Pittsburgh, PA, 15213
7PROFITH “PROmoting FITness and Health Through Physical Activity” Research Group, Sport and Health University Research Institute (iMUDS), Department of Physical and Sports Education, Faculty of Sport Sciences, University of Granada, Granada, Spain
8College of Science, Health, Engineering, and Education, Murdoch University, Perth, Australia
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Andrea M. Weinstein
9Department of Psychiatry, University of Pittsburgh, PA, 15213
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Shalini Padmanabhan
10The Michael J. Fox Foundation for Parkinson’s Research, Grand Central Station, P.O. Box 4777, New York, NY 10120, USA
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11The Fox BioNet Investigators; full author list and affiliations in supplemental materials
Francesca Tonelli
4Medical Research Council Protein Phosphorylation and Ubiquitylation Unit, University of Dundee, Dundee, DD1 5EH, UK
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Dario R. Alessi
3Molecular and Clinical Medicine, Ninewells Hospital and Medical School, University of Dundee, Dundee, DD1 9SY, UK
4Medical Research Council Protein Phosphorylation and Ubiquitylation Unit, University of Dundee, Dundee, DD1 5EH, UK
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Sruti Shiva
12Department of Medicine, University of Pittsburgh, Pittsburgh, PA 15260
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Laurie H. Sanders
1Departments of Neurology and Pathology, Duke University School of Medicine, Durham, NC, 27710
2Duke Center for Neurodegeneration and Neurotherapeutics, Duke University, Durham, North Carolina
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  • For correspondence: laurie.sanders@duke.edu
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Abstract

Parkinson’s disease (PD) is the most common neurodegenerative movement disorder and neuroprotective interventions remain elusive. High throughput biomarkers aimed to stratify patients based on shared etiology is one critical path to the success of disease-modifying therapies in clinical trials. Mitochondrial dysfunction plays a prominent role in the pathogenesis of PD. Previously, we found brain region-specific mitochondrial DNA (mtDNA) damage accumulation in neuronal and in vivo PD models, as well as human PD postmortem brain tissue. In this study, to investigate mtDNA damage as a potential blood biomarker for PD, we describe a novel Mito DNADX assay that allows for the accurate real-time quantification of mtDNA damage in a 96-well platform, compatible with assessing large cohorts of patient samples. We found that levels of mtDNA damage were increased in blood derived from early-stage idiopathic PD patients or those harboring the pathogenic LRRK2 G2019S mutation compared to age-matched healthy controls. Given that increased mtDNA damage was also found in non-manifesting LRRK2 mutation carriers, mtDNA damage may begin to accumulate prior to a clinical PD diagnosis. LRRK2 kinase inhibition mitigated mtDNA damage in idiopathic PD models and patient-derived cells. The latter observations further substantiate a mechanistic role for wild-type LRRK2 kinase activity in idiopathic PD and support mtDNA damage reversal as a suitable approach to slow PD-related pathology. In light of recent advances in the field of precision medicine, the analysis of mtDNA damage as a blood-based patient stratification biomarker should be included in future clinical trials.

One Sentence Summary Blood test identifies Parkinson’s patients most likely to respond to mitochondria-targeted therapeutics facilitating a precision medicine approach.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted February 09, 2022.
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A mitochondrial blood-based patient stratification candidate biomarker for Parkinson’s disease
Rui Qi, Esther Sammler, Claudia P. Gonzalez-Hunt, Nicholas Pena, Jeremy P. Rouanet, Steven Goodson, Marie Fuzatti, Fabio Blandini, Kirk I. Erickson, Andrea M. Weinstein, Shalini Padmanabhan, Fox BioNet (FBN) investigators, Francesca Tonelli, Dario R. Alessi, Sruti Shiva, Laurie H. Sanders
bioRxiv 2022.02.07.479309; doi: https://doi.org/10.1101/2022.02.07.479309
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A mitochondrial blood-based patient stratification candidate biomarker for Parkinson’s disease
Rui Qi, Esther Sammler, Claudia P. Gonzalez-Hunt, Nicholas Pena, Jeremy P. Rouanet, Steven Goodson, Marie Fuzatti, Fabio Blandini, Kirk I. Erickson, Andrea M. Weinstein, Shalini Padmanabhan, Fox BioNet (FBN) investigators, Francesca Tonelli, Dario R. Alessi, Sruti Shiva, Laurie H. Sanders
bioRxiv 2022.02.07.479309; doi: https://doi.org/10.1101/2022.02.07.479309

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