Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Lin28b specifies an innate-like lineage of CD8+ T cells in early life

Neva B. Watson, View ORCID ProfileRavi K. Patel, Oyebola O. Oyesola, Nathan Laniewski, Jennifer K. Grenier, Jocelyn Wang, Cybelle Tabilas, Kristel J. Yee Mon, Seth P. Peng, Samantha P. Wesnak, Kito Nzingha, Norah L. Smith, Miles P. Davenport, Elia D. Tait Wojno, Kristin M. Scheible, Andrew Grimson, Brian D. Rudd
doi: https://doi.org/10.1101/2022.02.14.480406
Neva B. Watson
1Department of Microbiology and Immunology, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Ravi K. Patel
2Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Ravi K. Patel
Oyebola O. Oyesola
4Department of Immunology, University of Washington, Seattle, WA 98109, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Nathan Laniewski
5David H. Smith Center for Vaccine Biology and Immunology, Department of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Jennifer K. Grenier
6Transcriptional Regulation and Expression Facility, Department of Biomedical Sciences, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Jocelyn Wang
1Department of Microbiology and Immunology, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Cybelle Tabilas
1Department of Microbiology and Immunology, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Kristel J. Yee Mon
1Department of Microbiology and Immunology, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Seth P. Peng
7Department of Clinical Science, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Samantha P. Wesnak
1Department of Microbiology and Immunology, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Kito Nzingha
8Institute for Immunology, University of Pennsylvania, Philadelphia, PA 19104, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Norah L. Smith
1Department of Microbiology and Immunology, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Miles P. Davenport
9Kirby Institute for Infection and Immunity, UNSW Australia, Sydney, New South Wales 2052, Australia
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Elia D. Tait Wojno
4Department of Immunology, University of Washington, Seattle, WA 98109, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Kristin M. Scheible
10Department of Pediatrics, University of Rochester, Rochester, NY 14642, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Andrew Grimson
2Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: bdr54@cornell.edu agrimson@cornell.edu
Brian D. Rudd
1Department of Microbiology and Immunology, Cornell University, Ithaca, NY 14853, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: bdr54@cornell.edu agrimson@cornell.edu
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

Abstract

The immune system is stratified into layers of specialized cells with distinct functions. Recently, Lin28b was shown to serve as a master regulator of fetal lymphopoiesis, programming the development of more innate-like lymphocytes in early life. However, it remains unclear whether Lin28b specifies innate functions in more conventional adaptive lymphocytes. In this report, we discovered that Lin28b promotes the development of a more innate-like lineage of CD8+ T cells that is capable of protecting the host against a wide variety of pathogens in the absence of TCR stimulation. Using RNA-seq and ATAC-seq, we found that Lin28b transcriptionally and epigenetically programs CD8+ T cells to be highly responsive to innate cytokines. We also performed scRNAseq and found that the shift from innate-like CD8+ T cells in early life to adaptive CD8+ T cells in adulthood is mediated by changes in the abundance of distinct subsets of cells. Remarkably, the innate CD8+ T cell subset predominates in early life but is also present in adult mice and humans. Collectively, our findings demonstrate that neonatal CD8+ T cells are a distinct lineage of lymphocytes that provide the host with innate defense in early life.

One sentence Summary High-dimensional analysis reveals how Lin28b programs neonatal CD8+ T cells for innate defense.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵3 Co-first author

  • ↵11 Co-senior author

  • ↵12 Lead Contact

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
Back to top
PreviousNext
Posted February 16, 2022.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Lin28b specifies an innate-like lineage of CD8+ T cells in early life
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Lin28b specifies an innate-like lineage of CD8+ T cells in early life
Neva B. Watson, Ravi K. Patel, Oyebola O. Oyesola, Nathan Laniewski, Jennifer K. Grenier, Jocelyn Wang, Cybelle Tabilas, Kristel J. Yee Mon, Seth P. Peng, Samantha P. Wesnak, Kito Nzingha, Norah L. Smith, Miles P. Davenport, Elia D. Tait Wojno, Kristin M. Scheible, Andrew Grimson, Brian D. Rudd
bioRxiv 2022.02.14.480406; doi: https://doi.org/10.1101/2022.02.14.480406
Reddit logo Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
Lin28b specifies an innate-like lineage of CD8+ T cells in early life
Neva B. Watson, Ravi K. Patel, Oyebola O. Oyesola, Nathan Laniewski, Jennifer K. Grenier, Jocelyn Wang, Cybelle Tabilas, Kristel J. Yee Mon, Seth P. Peng, Samantha P. Wesnak, Kito Nzingha, Norah L. Smith, Miles P. Davenport, Elia D. Tait Wojno, Kristin M. Scheible, Andrew Grimson, Brian D. Rudd
bioRxiv 2022.02.14.480406; doi: https://doi.org/10.1101/2022.02.14.480406

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Immunology
Subject Areas
All Articles
  • Animal Behavior and Cognition (4372)
  • Biochemistry (9561)
  • Bioengineering (7075)
  • Bioinformatics (24800)
  • Biophysics (12581)
  • Cancer Biology (9929)
  • Cell Biology (14306)
  • Clinical Trials (138)
  • Developmental Biology (7935)
  • Ecology (12085)
  • Epidemiology (2067)
  • Evolutionary Biology (15965)
  • Genetics (10910)
  • Genomics (14716)
  • Immunology (9850)
  • Microbiology (23596)
  • Molecular Biology (9463)
  • Neuroscience (50750)
  • Paleontology (369)
  • Pathology (1537)
  • Pharmacology and Toxicology (2675)
  • Physiology (4003)
  • Plant Biology (8646)
  • Scientific Communication and Education (1506)
  • Synthetic Biology (2388)
  • Systems Biology (6417)
  • Zoology (1345)