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IRF4 deficiency vulnerates B cell progeny for leukemogenesis via somatically acquired Jak3 mutations conferring IL-7 hypersensitivity

Dennis Das Gupta, Christoph Paul, Nadine Samel, Maria Bieringer, Daniel Staudenraus, Federico Marini, Hartmann Raifer, Lisa Menke, Lea Hansal, Bärbel Camara, Edith Roth, Patrick Daum, Michael Wanzel, Marco Mernberger, Andrea Nist, Uta-Maria Bauer, Frederik Helmprobst, Malte Buchholz, Katrin Roth, Lorenz Bastian, Alina M Hartmann, Claudia Baldus, Koichi Ikuta, Andreas Neubauer, Andreas Burchert, Hans-Martin Jäck, Matthias Klein, Tobias Bopp, Thorsten Stiewe, Axel Pagenstecher, Michael Lohoff
doi: https://doi.org/10.1101/2022.02.16.480573
Dennis Das Gupta
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
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  • For correspondence: dasguptd@uni-marburg.de
Christoph Paul
2University Hospital Gießen and Marburg, and Philipps University, Dept. Ophthalmology, Marburg, Germany
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Nadine Samel
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
3MVZ for Laboratory Medicine and Microbiology, Koblenz-Mittelrhein, Germany
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Maria Bieringer
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
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Daniel Staudenraus
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
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Federico Marini
4Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), University Medical Center of the Johannes Gutenberg-University Mainz, Germany
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Hartmann Raifer
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
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Lisa Menke
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
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Lea Hansal
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
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Bärbel Camara
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
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Edith Roth
5Division of Molecular Immunology, Nikolaus-Fiebiger Center, University of Erlangen-Nürnberg, Erlangen, Germany
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Patrick Daum
5Division of Molecular Immunology, Nikolaus-Fiebiger Center, University of Erlangen-Nürnberg, Erlangen, Germany
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Michael Wanzel
6Institute for Molecular Biology and Tumor Research (IMT), Center for Tumor- and Immunobiology (ZTI), Philipps University Marburg, Germany
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Marco Mernberger
6Institute for Molecular Biology and Tumor Research (IMT), Center for Tumor- and Immunobiology (ZTI), Philipps University Marburg, Germany
7Genomics Core Facility, Philipps University Marburg, Germany
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Andrea Nist
6Institute for Molecular Biology and Tumor Research (IMT), Center for Tumor- and Immunobiology (ZTI), Philipps University Marburg, Germany
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Uta-Maria Bauer
6Institute for Molecular Biology and Tumor Research (IMT), Center for Tumor- and Immunobiology (ZTI), Philipps University Marburg, Germany
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Frederik Helmprobst
8Core Facility for Mouse Pathology and Electron Microscopy, Philipps University Marburg, Germany
9University Hospital Gießen and Marburg, and Philipps University, Institute of Neuropathology, Marburg, Germany
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Malte Buchholz
10University Hospital Gießen and Marburg, and Philipps University, Clinic for Gastroenterology and Core Facility Small Animal Ultrasound, Marburg, Germany
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Katrin Roth
11Core facility for Cellular Imaging, Philipps University Marburg, Germany
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Lorenz Bastian
12Medical Department II, Hematology and Oncology, University Medical Center Schleswig-Holstein, Kiel, Germany
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Alina M Hartmann
12Medical Department II, Hematology and Oncology, University Medical Center Schleswig-Holstein, Kiel, Germany
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Claudia Baldus
12Medical Department II, Hematology and Oncology, University Medical Center Schleswig-Holstein, Kiel, Germany
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Koichi Ikuta
13Institute for Frontier Life and Medical Sciences, Kyoto University, Japan
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Andreas Neubauer
14University Hospital Gießen and Marburg, and Philipps University, Dept. Hematology, Oncology and Immunology, Marburg, Germany
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Andreas Burchert
14University Hospital Gießen and Marburg, and Philipps University, Dept. Hematology, Oncology and Immunology, Marburg, Germany
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Hans-Martin Jäck
5Division of Molecular Immunology, Nikolaus-Fiebiger Center, University of Erlangen-Nürnberg, Erlangen, Germany
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Matthias Klein
15Institute for Immunology, Research Center for Immunotherapy (FZI), University Cancer Center, University Medical Center of the Johannes Gutenberg-University Mainz, Germany
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Tobias Bopp
15Institute for Immunology, Research Center for Immunotherapy (FZI), University Cancer Center, University Medical Center of the Johannes Gutenberg-University Mainz, Germany
16German Cancer Consortium (DKTK)
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Thorsten Stiewe
6Institute for Molecular Biology and Tumor Research (IMT), Center for Tumor- and Immunobiology (ZTI), Philipps University Marburg, Germany
7Genomics Core Facility, Philipps University Marburg, Germany
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Axel Pagenstecher
8Core Facility for Mouse Pathology and Electron Microscopy, Philipps University Marburg, Germany
9University Hospital Gießen and Marburg, and Philipps University, Institute of Neuropathology, Marburg, Germany
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Michael Lohoff
1Institute for med. Microbiology & Hospital Hygiene, Philipps University Marburg, Germany
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Abstract

The processes leading from disturbed B cell development to adult B cell progenitor acute lymphoblastic leukemia (BCP-ALL) are poorly understood. Here, we describe Irf4−/− mice as prone to developing BCP-ALL with age. Irf4−/− preB-I cells exhibited impaired differentiation but enhanced proliferation in response to IL-7, along with reduced retention in the IL-7 providing bone marrow niche due to decreased CXCL12 responsiveness. Thus selected, preB-I cells acquired Jak3 mutations, probably following irregular AID activity, resulting in malignant transformation. We demonstrate heightened IL-7 sensitivity due to Jak3 mutants, devise a model to explain it and describe structural and functional similarities to Jak2 mutations often occurring in human Ph-like ALL. Finally, targeting JAK signaling with Ruxolitinib in vivo prolonged survival of mice bearing established Irf4−/− leukemia. Intriguingly, organ infiltration including leukemic meningeosis was selectively reduced without affecting blood blast counts. In this work, we present spontaneous leukemogenesis following IRF4 deficiency with potential implications for high-risk BCP-ALL in adult humans.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • The authors have declared that no conflict of interest exists.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted February 18, 2022.
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IRF4 deficiency vulnerates B cell progeny for leukemogenesis via somatically acquired Jak3 mutations conferring IL-7 hypersensitivity
Dennis Das Gupta, Christoph Paul, Nadine Samel, Maria Bieringer, Daniel Staudenraus, Federico Marini, Hartmann Raifer, Lisa Menke, Lea Hansal, Bärbel Camara, Edith Roth, Patrick Daum, Michael Wanzel, Marco Mernberger, Andrea Nist, Uta-Maria Bauer, Frederik Helmprobst, Malte Buchholz, Katrin Roth, Lorenz Bastian, Alina M Hartmann, Claudia Baldus, Koichi Ikuta, Andreas Neubauer, Andreas Burchert, Hans-Martin Jäck, Matthias Klein, Tobias Bopp, Thorsten Stiewe, Axel Pagenstecher, Michael Lohoff
bioRxiv 2022.02.16.480573; doi: https://doi.org/10.1101/2022.02.16.480573
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IRF4 deficiency vulnerates B cell progeny for leukemogenesis via somatically acquired Jak3 mutations conferring IL-7 hypersensitivity
Dennis Das Gupta, Christoph Paul, Nadine Samel, Maria Bieringer, Daniel Staudenraus, Federico Marini, Hartmann Raifer, Lisa Menke, Lea Hansal, Bärbel Camara, Edith Roth, Patrick Daum, Michael Wanzel, Marco Mernberger, Andrea Nist, Uta-Maria Bauer, Frederik Helmprobst, Malte Buchholz, Katrin Roth, Lorenz Bastian, Alina M Hartmann, Claudia Baldus, Koichi Ikuta, Andreas Neubauer, Andreas Burchert, Hans-Martin Jäck, Matthias Klein, Tobias Bopp, Thorsten Stiewe, Axel Pagenstecher, Michael Lohoff
bioRxiv 2022.02.16.480573; doi: https://doi.org/10.1101/2022.02.16.480573

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