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Autophagy promotes organelle clearance and organized cell separation of living root cap cells in Arabidopsis thaliana

View ORCID ProfileTatsuaki Goh, View ORCID ProfileKaoru Sakamoto, View ORCID ProfilePengfei Wang, View ORCID ProfileSaki Kozono, View ORCID ProfileKoki Ueno, View ORCID ProfileShunsuke Miyashima, View ORCID ProfileKoichi Toyokura, View ORCID ProfileHidehiro Fukaki, View ORCID ProfileByung-Ho Kang, View ORCID ProfileKeiji Nakajima
doi: https://doi.org/10.1101/2022.02.16.480624
Tatsuaki Goh
1Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan
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  • For correspondence: goh@bs.naist.jp k-nakaji@bs.naist.jp
Kaoru Sakamoto
1Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan
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Pengfei Wang
2School of Life Sciences, Centre for Cell & Developmental Biology and State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong, China
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Saki Kozono
1Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan
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Koki Ueno
1Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan
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Shunsuke Miyashima
1Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan
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Koichi Toyokura
3Department of Biology, Graduate School of Science, Kobe University, Rokkodai, Kobe 657-8501, Japan
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Hidehiro Fukaki
3Department of Biology, Graduate School of Science, Kobe University, Rokkodai, Kobe 657-8501, Japan
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Byung-Ho Kang
2School of Life Sciences, Centre for Cell & Developmental Biology and State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong, China
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Keiji Nakajima
1Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan
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  • For correspondence: goh@bs.naist.jp k-nakaji@bs.naist.jp
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Abstract

The root cap is a multi-layered tissue covering the tip of a plant root that directs root growth through its unique functions such as gravity-sensing and rhizosphere interaction. To prevent damages from the soil environment, cells in the root cap continuously turn over through balanced cell division and cell detachment at the inner and the outer cell layers, respectively. Upon displacement toward the outermost layer, columella cells at the central root cap domain functionally transition from gravity-sensing cells to secretory cells, but the mechanisms underlying this drastic cell fate transition are largely unknown. By using live-cell tracking microscopy, we here show that organelles in the outermost cell layer undergo dramatic rearrangements, and at least a part of this rearrangement depends on spatiotemporally regulated activation of autophagy. Notably, this root cap autophagy does not lead to immediate cell death, but rather is necessary for organized separation of living root cap cells, highlighting a previously undescribed role of developmentally regulated autophagy in plants.

Summary statement Time-lapse microscope imaging revealed spatiotemporal dynamics of intracellular reorganization associated with functional transition and cell separation in the Arabidopsis root cap and the roles of autophagy in this process.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted February 18, 2022.
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Autophagy promotes organelle clearance and organized cell separation of living root cap cells in Arabidopsis thaliana
Tatsuaki Goh, Kaoru Sakamoto, Pengfei Wang, Saki Kozono, Koki Ueno, Shunsuke Miyashima, Koichi Toyokura, Hidehiro Fukaki, Byung-Ho Kang, Keiji Nakajima
bioRxiv 2022.02.16.480624; doi: https://doi.org/10.1101/2022.02.16.480624
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Autophagy promotes organelle clearance and organized cell separation of living root cap cells in Arabidopsis thaliana
Tatsuaki Goh, Kaoru Sakamoto, Pengfei Wang, Saki Kozono, Koki Ueno, Shunsuke Miyashima, Koichi Toyokura, Hidehiro Fukaki, Byung-Ho Kang, Keiji Nakajima
bioRxiv 2022.02.16.480624; doi: https://doi.org/10.1101/2022.02.16.480624

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