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Comparative transcriptomics reveal highly conserved regional programs between porcine and human colonic enteric nervous system

View ORCID ProfileTao Li, Marco Morselli, Trent Su, Million Mulugeta, Muriel Larauche, Matteo Pellegrini, Yvette Taché, View ORCID ProfilePu-Qing Yuan
doi: https://doi.org/10.1101/2022.02.24.480770
Tao Li
1CURE/Digestive Diseases Research Center, Vatche and Tamar Manoukian Digestive Diseases Division, Department of Medicine, David Geffen School of Medicine, University of California at Los Angeles (UCLA), Los Angeles, CA, USA
4VA Greater Los Angeles Healthcare System, Los Angeles, CA, USA
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  • ORCID record for Tao Li
Marco Morselli
2Department of Molecular, Cell, & Developmental Biology, UCLA, Los Angeles, CA, USA
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Trent Su
3Department of Biological Chemistry, UCLA, Los Angeles, CA, USA
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Million Mulugeta
1CURE/Digestive Diseases Research Center, Vatche and Tamar Manoukian Digestive Diseases Division, Department of Medicine, David Geffen School of Medicine, University of California at Los Angeles (UCLA), Los Angeles, CA, USA
4VA Greater Los Angeles Healthcare System, Los Angeles, CA, USA
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Muriel Larauche
1CURE/Digestive Diseases Research Center, Vatche and Tamar Manoukian Digestive Diseases Division, Department of Medicine, David Geffen School of Medicine, University of California at Los Angeles (UCLA), Los Angeles, CA, USA
4VA Greater Los Angeles Healthcare System, Los Angeles, CA, USA
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Matteo Pellegrini
2Department of Molecular, Cell, & Developmental Biology, UCLA, Los Angeles, CA, USA
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Yvette Taché
1CURE/Digestive Diseases Research Center, Vatche and Tamar Manoukian Digestive Diseases Division, Department of Medicine, David Geffen School of Medicine, University of California at Los Angeles (UCLA), Los Angeles, CA, USA
4VA Greater Los Angeles Healthcare System, Los Angeles, CA, USA
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Pu-Qing Yuan
1CURE/Digestive Diseases Research Center, Vatche and Tamar Manoukian Digestive Diseases Division, Department of Medicine, David Geffen School of Medicine, University of California at Los Angeles (UCLA), Los Angeles, CA, USA
4VA Greater Los Angeles Healthcare System, Los Angeles, CA, USA
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  • For correspondence: pqyuan@mednet.ucla.edu
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Abstract

The porcine gut is increasingly regarded as a useful translational model. The enteric nerve system (ENS) in the colon coordinates diverse functions. However, knowledge of the molecular profiling of porcine ENS and its similarity to that of human is limited. We identified the distinct transcriptional programs associated with functional characteristics between inner submucosal and myenteric ganglia (ISG, MG) in porcine proximal and distal colon (p-pC, p-dC) using bulk RNA sequencing (RNA-seq) and single-cell RNA-seq. Comparative transcriptomics of MG in corresponding colonic regions of porcine and human revealed highly conserved programs existing in p-pC and p-dC, which explained >90% of their transcriptomic responses to vagal nerve stimulation (VNS), suggesting that p-pC and p-dC could serve as predictors in translational studies. The conserved programs specific for inflammatory modulation were displayed in porcine with VNS. This study provides a valuable transcriptomic resource for understanding of human colonic functions and neuromodulation using porcine model.

Competing Interest Statement

The authors have declared no competing interest.

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Posted February 25, 2022.
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Comparative transcriptomics reveal highly conserved regional programs between porcine and human colonic enteric nervous system
Tao Li, Marco Morselli, Trent Su, Million Mulugeta, Muriel Larauche, Matteo Pellegrini, Yvette Taché, Pu-Qing Yuan
bioRxiv 2022.02.24.480770; doi: https://doi.org/10.1101/2022.02.24.480770
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Comparative transcriptomics reveal highly conserved regional programs between porcine and human colonic enteric nervous system
Tao Li, Marco Morselli, Trent Su, Million Mulugeta, Muriel Larauche, Matteo Pellegrini, Yvette Taché, Pu-Qing Yuan
bioRxiv 2022.02.24.480770; doi: https://doi.org/10.1101/2022.02.24.480770

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