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Efficient compartmentalization in insect bacteriomes protects symbiotic bacteria from host immune system

View ORCID ProfileMariana Galvão Ferrarini, View ORCID ProfileElisa Dell’Aglio, Agnès Vallier, Séverine Balmand, View ORCID ProfileCarole Vincent-Monégat, View ORCID ProfileSandrine Hughes, View ORCID ProfileBenjamin Gillet, View ORCID ProfileNicolas Parisot, View ORCID ProfileAnna Zaidman-Rémy, View ORCID ProfileCristina Vieira, View ORCID ProfileAbdelaziz Heddi, View ORCID ProfileRita Rebollo
doi: https://doi.org/10.1101/2022.03.18.484386
Mariana Galvão Ferrarini
1Univ Lyon, INRAE, INSA-Lyon, BF2I, UMR 203, 69621 Villeurbanne, France
2Laboratoire de Biométrie et Biologie Evolutive, UMR5558, Université Lyon 1, Université Lyon, Villeurbanne, France
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  • ORCID record for Mariana Galvão Ferrarini
Elisa Dell’Aglio
1Univ Lyon, INRAE, INSA-Lyon, BF2I, UMR 203, 69621 Villeurbanne, France
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  • ORCID record for Elisa Dell’Aglio
Agnès Vallier
1Univ Lyon, INRAE, INSA-Lyon, BF2I, UMR 203, 69621 Villeurbanne, France
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Séverine Balmand
1Univ Lyon, INRAE, INSA-Lyon, BF2I, UMR 203, 69621 Villeurbanne, France
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Carole Vincent-Monégat
3Univ Lyon, INSA-Lyon, INRAE, BF2I, UMR 203, 69621 Villeurbanne, France
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Sandrine Hughes
4UMR5242, Institut de Génomique Fonctionnelle de Lyon (IGFL), Ecole Normale Supérieure de Lyon, Centre National de la Recherche Scientifique (CNRS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon (Univ Lyon), F-69007 Lyon, France
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Benjamin Gillet
4UMR5242, Institut de Génomique Fonctionnelle de Lyon (IGFL), Ecole Normale Supérieure de Lyon, Centre National de la Recherche Scientifique (CNRS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon (Univ Lyon), F-69007 Lyon, France
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Nicolas Parisot
3Univ Lyon, INSA-Lyon, INRAE, BF2I, UMR 203, 69621 Villeurbanne, France
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Anna Zaidman-Rémy
3Univ Lyon, INSA-Lyon, INRAE, BF2I, UMR 203, 69621 Villeurbanne, France
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Cristina Vieira
2Laboratoire de Biométrie et Biologie Evolutive, UMR5558, Université Lyon 1, Université Lyon, Villeurbanne, France
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  • For correspondence: rita.rebollo@inrae.fr
Abdelaziz Heddi
3Univ Lyon, INSA-Lyon, INRAE, BF2I, UMR 203, 69621 Villeurbanne, France
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  • For correspondence: rita.rebollo@inrae.fr
Rita Rebollo
1Univ Lyon, INRAE, INSA-Lyon, BF2I, UMR 203, 69621 Villeurbanne, France
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  • ORCID record for Rita Rebollo
  • For correspondence: rita.rebollo@inrae.fr
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Abstract

Background Many insects house symbiotic intracellular bacteria (endosymbionts) that provide them with essential nutrients, thus promoting usage of nutrient-poor habitats. Endosymbiont seclusion within host specialized cells, called bacteriocytes, often organized in a dedicated organ, the bacteriome, is crucial in protecting them from host immune defenses while avoiding chronic host immune activation. Previous evidence obtained in the cereal weevil Sitophilus oryzae has shown that bacteriome immunity is activated against invading pathogens, suggesting endosymbionts might be targeted and impacted by immune effectors during an immune challenge. To pinpoint any molecular determinants associated with such challenges, we conducted a dual transcriptomic analysis of S. oryzae’s bacteriome subjected to immunogenic peptidoglycan fragments.

Results We show that upon immune challenge the bacteriome actively participates in the innate immune response via an induction of antimicrobial peptides (AMPs). Surprisingly, endosymbionts do not undergo any transcriptomic changes, indicating that this potential threat goes unnoticed. Immunohistochemistry showed that TCT-induced AMPs are located outside the bacteriome, excluding direct contact with the endosymbionts.

Conclusions This work demonstrates that endosymbiont protection during an immune challenge is mainly achieved by efficient confinement within bacteriomes, which provides physical separation between host systemic response and endosymbionts.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Reshuffle of the manuscript layout and change in title. Addition of other hypothesis to explain AMP production in bacteriomes.

  • List of abbreviations

    AMP
    (antimicrobial peptide)
    BSA
    (bovine serum albumin)
    cDNA
    (complementary DNA)
    DAPI
    (4,6-diamidino-2-phenylindole)
    EtOH
    (ethanol)
    IMD
    (immune deficiency)
    IS
    (insertion sequence)
    L4
    (fourth instar larvae)
    MAMPs
    (microbial-associated molecular patterns)
    p-adj
    (adjusted p-values)
    PBS
    (phosphate buffered saline)
    PFA
    (paraformaldehyde)
    PG
    (proteoglycan)
    T3SS
    (type III secretion system)
    TA
    (toxinantitoxin)
    TCT
    (tracheal cytotoxin)
    TPM
    (transcripts per million)
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    Posted August 03, 2022.
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    Efficient compartmentalization in insect bacteriomes protects symbiotic bacteria from host immune system
    Mariana Galvão Ferrarini, Elisa Dell’Aglio, Agnès Vallier, Séverine Balmand, Carole Vincent-Monégat, Sandrine Hughes, Benjamin Gillet, Nicolas Parisot, Anna Zaidman-Rémy, Cristina Vieira, Abdelaziz Heddi, Rita Rebollo
    bioRxiv 2022.03.18.484386; doi: https://doi.org/10.1101/2022.03.18.484386
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    Efficient compartmentalization in insect bacteriomes protects symbiotic bacteria from host immune system
    Mariana Galvão Ferrarini, Elisa Dell’Aglio, Agnès Vallier, Séverine Balmand, Carole Vincent-Monégat, Sandrine Hughes, Benjamin Gillet, Nicolas Parisot, Anna Zaidman-Rémy, Cristina Vieira, Abdelaziz Heddi, Rita Rebollo
    bioRxiv 2022.03.18.484386; doi: https://doi.org/10.1101/2022.03.18.484386

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