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High resolution species assignment of Anopheles mosquitoes using k-mer distances on targeted sequences
View ORCID ProfileMarilou Boddé, View ORCID ProfileAlex Makunin, View ORCID ProfileDiego Ayala, View ORCID ProfileLemonde Bouafa, View ORCID ProfileAbdoulaye Diabaté, View ORCID ProfileUwem Friday Ekpo, View ORCID ProfileMahamadi Kientega, View ORCID ProfileGilbert Le Goff, View ORCID ProfileBoris K. Makanga, Marc F. Ngangue, View ORCID ProfileOlaitan Olamide Omitola, View ORCID ProfileNil Rahola, View ORCID ProfileFrederic Tripet, View ORCID ProfileRichard Durbin, View ORCID ProfileMara K. N. Lawniczak
doi: https://doi.org/10.1101/2022.03.18.484650
Marilou Boddé
1Department of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK
2Wellcome Sanger Institute, Hinxton, CB10 1SA, UK
Alex Makunin
2Wellcome Sanger Institute, Hinxton, CB10 1SA, UK
Diego Ayala
3Institut de Recherche pour le Développement, MIVEGEC, Univ. Montpellier, CNRS, IRD, Montpellier, 34394, France
Lemonde Bouafa
3Institut de Recherche pour le Développement, MIVEGEC, Univ. Montpellier, CNRS, IRD, Montpellier, 34394, France
Abdoulaye Diabaté
4Institut de Recherche en Sciences de la Santé, Direction Régionale de l’Ouest, 399 Avenue de la Liberté, (+226) 20981880, Bobo-Dioulasso, Burkina Faso
Uwem Friday Ekpo
5Federal University of Agriculture Abeokuta, Alabata 110001, Abeokuta, Ogun State, Nigeria
Mahamadi Kientega
4Institut de Recherche en Sciences de la Santé, Direction Régionale de l’Ouest, 399 Avenue de la Liberté, (+226) 20981880, Bobo-Dioulasso, Burkina Faso
Gilbert Le Goff
3Institut de Recherche pour le Développement, MIVEGEC, Univ. Montpellier, CNRS, IRD, Montpellier, 34394, France
Boris K. Makanga
6Institut de Recherche en Ecologie Tropicale, BP13354, Libreville, Gabon
Marc F. Ngangue
7Centre International de Recherches Medicales de Franceville, Franceville, Gabon
Olaitan Olamide Omitola
5Federal University of Agriculture Abeokuta, Alabata 110001, Abeokuta, Ogun State, Nigeria
Nil Rahola
3Institut de Recherche pour le Développement, MIVEGEC, Univ. Montpellier, CNRS, IRD, Montpellier, 34394, France
Frederic Tripet
8Centre for Applied Entomology and Parasitology, Keele University, Newcastle, ST5 5BG, UK
Richard Durbin
1Department of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK
2Wellcome Sanger Institute, Hinxton, CB10 1SA, UK
Mara K. N. Lawniczak
2Wellcome Sanger Institute, Hinxton, CB10 1SA, UK
Article usage
Posted March 20, 2022.
High resolution species assignment of Anopheles mosquitoes using k-mer distances on targeted sequences
Marilou Boddé, Alex Makunin, Diego Ayala, Lemonde Bouafa, Abdoulaye Diabaté, Uwem Friday Ekpo, Mahamadi Kientega, Gilbert Le Goff, Boris K. Makanga, Marc F. Ngangue, Olaitan Olamide Omitola, Nil Rahola, Frederic Tripet, Richard Durbin, Mara K. N. Lawniczak
bioRxiv 2022.03.18.484650; doi: https://doi.org/10.1101/2022.03.18.484650
High resolution species assignment of Anopheles mosquitoes using k-mer distances on targeted sequences
Marilou Boddé, Alex Makunin, Diego Ayala, Lemonde Bouafa, Abdoulaye Diabaté, Uwem Friday Ekpo, Mahamadi Kientega, Gilbert Le Goff, Boris K. Makanga, Marc F. Ngangue, Olaitan Olamide Omitola, Nil Rahola, Frederic Tripet, Richard Durbin, Mara K. N. Lawniczak
bioRxiv 2022.03.18.484650; doi: https://doi.org/10.1101/2022.03.18.484650
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