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S-adenosylmethionine synthases specify distinct H3K4me3 populations and gene expression patterns during heat stress

View ORCID ProfileAdwait A. Godbole, View ORCID ProfileSneha Gopalan, View ORCID ProfileThien-Kim Nguyen, View ORCID ProfileAlexander Munden, Paula Vo, View ORCID ProfileCaroline A. Lewis, View ORCID ProfileJessica B. Spinelli, Thomas G. Fazzio, View ORCID ProfileAmy K. Walker
doi: https://doi.org/10.1101/2022.03.30.486419
Adwait A. Godbole
1Program in Molecular Medicine, UMASS Chan Medical School, Worcester, MA 01605
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Sneha Gopalan
2Cancer Center, UMASS Chan Medical School, Worcester, MA 01605
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Thien-Kim Nguyen
1Program in Molecular Medicine, UMASS Chan Medical School, Worcester, MA 01605
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Alexander Munden
1Program in Molecular Medicine, UMASS Chan Medical School, Worcester, MA 01605
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Paula Vo
1Program in Molecular Medicine, UMASS Chan Medical School, Worcester, MA 01605
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Caroline A. Lewis
1Program in Molecular Medicine, UMASS Chan Medical School, Worcester, MA 01605
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Jessica B. Spinelli
1Program in Molecular Medicine, UMASS Chan Medical School, Worcester, MA 01605
2Cancer Center, UMASS Chan Medical School, Worcester, MA 01605
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Thomas G. Fazzio
2Cancer Center, UMASS Chan Medical School, Worcester, MA 01605
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Amy K. Walker
1Program in Molecular Medicine, UMASS Chan Medical School, Worcester, MA 01605
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  • ORCID record for Amy K. Walker
  • For correspondence: amy.walker@umassmed.edu
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Abstract

Methylation is a widely occurring modification that requires the methyl donor S-adenosylmethionine (SAM) and acts in regulation of gene expression and other processes. SAM is synthesized from methionine, which is imported or generated through the 1-carbon cycle (1CC). Alterations in 1CC function have clear effects on lifespan and stress responses, but the wide distribution of this modification has made identification of specific mechanistic links difficult. Exploiting a dynamic stress-induced transcription model, we find that two SAM synthases in Caenorhabditis elegans, SAMS-1 and SAMS-4, contribute differently to modification of H3K4me3, gene expression and survival. We find that sams-4 enhances H3K4me3 in heat shocked animals lacking sams-1, however, sams-1 cannot compensate for sams-4, which is required to survive heat stress. This suggests that the regulatory functions of SAM depend on its enzymatic source and that provisioning of SAM may be an important regulatory step linking 1CC function to phenotypes in aging and stress.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • We have revised the manuscript, adding additional metabolomics and survival data. In addition, we have expanded the methods section for our C. elegans studies as well as the CUT&Tag. Authors have been added to reflect the additional metabolomics and bioinformatics studies.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted January 22, 2023.
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S-adenosylmethionine synthases specify distinct H3K4me3 populations and gene expression patterns during heat stress
Adwait A. Godbole, Sneha Gopalan, Thien-Kim Nguyen, Alexander Munden, Paula Vo, Caroline A. Lewis, Jessica B. Spinelli, Thomas G. Fazzio, Amy K. Walker
bioRxiv 2022.03.30.486419; doi: https://doi.org/10.1101/2022.03.30.486419
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S-adenosylmethionine synthases specify distinct H3K4me3 populations and gene expression patterns during heat stress
Adwait A. Godbole, Sneha Gopalan, Thien-Kim Nguyen, Alexander Munden, Paula Vo, Caroline A. Lewis, Jessica B. Spinelli, Thomas G. Fazzio, Amy K. Walker
bioRxiv 2022.03.30.486419; doi: https://doi.org/10.1101/2022.03.30.486419

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