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Control of pancreatic islet function and glucose homeostasis by a novel microexon program misregulated in type 2 diabetes

Jonàs Juan-Mateu, Simon Bajew, Marta Miret, Luis P. Íñiguez, Amaya López, Sophie Bonnal, Goutham Atla, Sílvia Bonàs-Guarch, Jorge Ferrer, Juan Valcárcel, View ORCID ProfileManuel Irimia
doi: https://doi.org/10.1101/2022.04.02.486809
Jonàs Juan-Mateu
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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  • For correspondence: jonas.juan@crg.eu juan.valcarcel@crg.eu mirimia@gmail.com
Simon Bajew
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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Marta Miret
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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Luis P. Íñiguez
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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Amaya López
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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Sophie Bonnal
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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Goutham Atla
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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Sílvia Bonàs-Guarch
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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Jorge Ferrer
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
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Juan Valcárcel
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
2Universitat Pompeu Fabra, Barcelona, Spain
3ICREA, Barcelona, Spain
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  • For correspondence: jonas.juan@crg.eu juan.valcarcel@crg.eu mirimia@gmail.com
Manuel Irimia
1Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain
2Universitat Pompeu Fabra, Barcelona, Spain
3ICREA, Barcelona, Spain
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  • ORCID record for Manuel Irimia
  • For correspondence: jonas.juan@crg.eu juan.valcarcel@crg.eu mirimia@gmail.com
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Abstract

Pancreatic islets control glucose homeostasis by the balanced secretion of insulin and other hormones, and its abnormal function causes diabetes or hypoglycemia. Here, we uncover a conserved program of alternative microexons included in mRNAs of islet cells, particularly in genes involved in vesicle transport and exocytosis. Islet microexons (IsletMICs) are regulated by the RNA binding protein SRRM3 and represent a subset of the larger neural program that are particularly sensitive to the levels of this regulator. Both SRRM3 and IsletMICs are induced by elevated glucose levels, and depletion of SRRM3 in beta cell lines and mouse islets, or repression of particular IsletMICs using antisense oligonucleotides, leads to inappropriate insulin secretion. Consistently, SRRM3 mutant mice display defects in islet cell identity and function, leading to hyperinsulinemic hypoglycemia. Importantly, human genetic variants that influence SRRM3 expression and IsletMIC inclusion in islets are associated with fasting glucose variation and type 2 diabetes risk.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted April 02, 2022.
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Control of pancreatic islet function and glucose homeostasis by a novel microexon program misregulated in type 2 diabetes
Jonàs Juan-Mateu, Simon Bajew, Marta Miret, Luis P. Íñiguez, Amaya López, Sophie Bonnal, Goutham Atla, Sílvia Bonàs-Guarch, Jorge Ferrer, Juan Valcárcel, Manuel Irimia
bioRxiv 2022.04.02.486809; doi: https://doi.org/10.1101/2022.04.02.486809
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Control of pancreatic islet function and glucose homeostasis by a novel microexon program misregulated in type 2 diabetes
Jonàs Juan-Mateu, Simon Bajew, Marta Miret, Luis P. Íñiguez, Amaya López, Sophie Bonnal, Goutham Atla, Sílvia Bonàs-Guarch, Jorge Ferrer, Juan Valcárcel, Manuel Irimia
bioRxiv 2022.04.02.486809; doi: https://doi.org/10.1101/2022.04.02.486809

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