Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Condensation of LINE-1 is required for retrotransposition

View ORCID ProfileSrinjoy Sil, View ORCID ProfileJef D Boeke, View ORCID ProfileLiam J Holt
doi: https://doi.org/10.1101/2022.04.11.487880
Srinjoy Sil
1Institute for Systems Genetics and Department of Biochemistry and Molecular Pharmacology, NYU Langone Health, New York, NY 10016
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Srinjoy Sil
Jef D Boeke
1Institute for Systems Genetics and Department of Biochemistry and Molecular Pharmacology, NYU Langone Health, New York, NY 10016
2Department of Biomedical Engineering, NYU Tandon School of Engineering, Brooklyn NY 11201
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Jef D Boeke
Liam J Holt
1Institute for Systems Genetics and Department of Biochemistry and Molecular Pharmacology, NYU Langone Health, New York, NY 10016
2Department of Biomedical Engineering, NYU Tandon School of Engineering, Brooklyn NY 11201
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Liam J Holt
  • For correspondence: [email protected]
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

Abstract

LINE-1 (L1) is the only autonomously active retrotransposon in the human genome, and accounts for 17% of the human genome. The L1 mRNA encodes two proteins, ORF1p and ORF2p. ORF1p is a homotrimeric RNA-binding protein that plays a critical role in assembling functional L1 ribonucleoprotein (RNP) complexes. Here we show that condensation of ORF1p is required for L1 retrotransposition. Using a combination of biochemical reconstitution and live-cell imaging, we demonstrate that RNA binding, electrostatic interactions, and trimer conformational dynamics together tune the properties of ORF1p assemblies to allow for efficient L1 condensate formation in cells. Furthermore, we directly relate the dynamics of ORF1p assembly to the ability to complete the entire retrotransposon life-cycle. Mutations that prevented ORF1 condensation led to loss of retrotransposition activity, while orthogonal restoration of coiled-coil conformational flexibility rescued both condensation and retrotransposition. Based on these observations, we propose that ORF1p oligomerization on L1 RNA drives the formation of a dynamic L1 condensate that is essential for retrotransposition.

Competing Interest Statement

Jef Boeke is a Founder and Director of CDI Labs, Inc., a Founder of and consultant to Neochromosome, Inc, a Founder, SAB member of and consultant to ReOpen Diagnostics, LLC and serves or served on the Scientific Advisory Board of the following: Sangamo, Inc., Modern Meadow, Inc., Rome Therapeutics, Inc., Sample6, Inc., Tessera Therapeutics, Inc. and the Wyss Institute.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
Back to top
PreviousNext
Posted April 11, 2022.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Condensation of LINE-1 is required for retrotransposition
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Condensation of LINE-1 is required for retrotransposition
Srinjoy Sil, Jef D Boeke, Liam J Holt
bioRxiv 2022.04.11.487880; doi: https://doi.org/10.1101/2022.04.11.487880
Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
Condensation of LINE-1 is required for retrotransposition
Srinjoy Sil, Jef D Boeke, Liam J Holt
bioRxiv 2022.04.11.487880; doi: https://doi.org/10.1101/2022.04.11.487880

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Cell Biology
Subject Areas
All Articles
  • Animal Behavior and Cognition (6095)
  • Biochemistry (13870)
  • Bioengineering (10572)
  • Bioinformatics (33597)
  • Biophysics (17313)
  • Cancer Biology (14380)
  • Cell Biology (20357)
  • Clinical Trials (138)
  • Developmental Biology (10973)
  • Ecology (16204)
  • Epidemiology (2067)
  • Evolutionary Biology (20518)
  • Genetics (13515)
  • Genomics (18807)
  • Immunology (13939)
  • Microbiology (32488)
  • Molecular Biology (13526)
  • Neuroscience (70842)
  • Paleontology (532)
  • Pathology (2222)
  • Pharmacology and Toxicology (3779)
  • Physiology (5958)
  • Plant Biology (12150)
  • Scientific Communication and Education (1826)
  • Synthetic Biology (3402)
  • Systems Biology (8240)
  • Zoology (1870)