New Results
StandardRat: A multi-center consensus protocol to enhance functional connectivity specificity in the rat brain
View ORCID ProfileJoanes Grandjean, View ORCID ProfileGabriel Desrosiers-Gregoire, Cynthia Anckaerts, View ORCID ProfileDiego Angeles-Valdez, Fadi Ayad, View ORCID ProfileDavid A Barrière, Ines Blockx, Aleksandra B Bortel, Margaret Broadwater, View ORCID ProfileBeatriz M Cardoso, View ORCID ProfileMarina Célestine, Jorge E Chavez-Negrete, Sangcheon Choi, Emma Christiaen, Perrin Clavijo, View ORCID ProfileLuis Colon-Perez, Samuel Cramer, View ORCID ProfileTolomeo Daniele, Elaine Dempsey, Yujian Diao, View ORCID ProfileArno Doelemeyer, David Dopfel, Lenka Dvořáková, View ORCID ProfileClaudia Falfán-Melgoza, View ORCID ProfileFrancisca F Fernandes, View ORCID ProfileCaitlin F Fowler, View ORCID ProfileAntonio Fuentes-Ibañez, View ORCID ProfileClément Garin, Eveline Gelderman, View ORCID ProfileCarla EM Golden, View ORCID ProfileChao CG Guo, View ORCID ProfileMarloes JAG Henckens, View ORCID ProfileLauren A Hennessy, Peter Herman, Nita Hofwijks, View ORCID ProfileCorey Horien, Tudor M Ionescu, View ORCID ProfileJolyon Jones, Johannes Kaesser, View ORCID ProfileEugene Kim, View ORCID ProfileHenriette Lambers, View ORCID ProfileAlberto Lazari, Sung-Ho Lee, View ORCID ProfileAmanda Lillywhite, Yikang Liu, Yanyan Y Liu, Alejandra López-Castro, Xavier López-Gil, Zilu Ma, View ORCID ProfileEilidh MacNicol, Dan Madularu, View ORCID ProfileFrancesca Mandino, Sabina Marciano, Matthew J McAuslan, Patrick McCunn, Alison McIntosh, View ORCID ProfileXianzong Meng, Lisa Meyer-Baese, View ORCID ProfileStephan Missault, View ORCID ProfileFederico Moro, View ORCID ProfileDaphne Naessens, Laura J Nava-Gomez, Hiroi Nonaka, Juan J Ortiz, Jaakko Paasonen, View ORCID ProfileLore M Peeters, Mickaël Pereira, View ORCID ProfilePablo D Perez, Marjory Pompilus, Malcolm Prior, Rustam Rakhmatullin, Henning M Reimann, Jonathan Reinwald, Rodrigo Triana de Rio, Alejandro Rivera-Olvera, Daniel Ruiz-Pérez, Gabriele Russo, Tobias J Rutten, Rie Ryoke, View ORCID ProfileMarkus Sack, View ORCID ProfilePiergiorgio Salvan, Basavaraju G Sanganahalli, Aileen Schroeter, View ORCID ProfileBhedita J Seewoo, Erwan Selingue, Aline Seuwen, View ORCID ProfileBowen Shi, View ORCID ProfileNikoloz Sirmpilatze, Joanna AB Smith, Corrie Smith, Filip Sobczak, View ORCID ProfilePetteri J Stenroos, Milou Straathof, Sandra Strobelt, View ORCID ProfileAkira Sumiyoshi, View ORCID ProfileKengo Takahashi, Maria E Torres-García, View ORCID ProfileRaul Tudela, View ORCID ProfileMonica van den Berg, View ORCID ProfileKajo van der Marel, Aran TB van Hout, Roberta Vertullo, View ORCID ProfileBenjamin Vidal, View ORCID ProfileRoel M Vrooman, Victora X Wang, View ORCID ProfileIsabel Wank, View ORCID ProfileDavid JG Watson, Ting Yin, Yongzhi Zhang, Stefan Zurbruegg, View ORCID ProfileSophie Achard, View ORCID ProfileSarael Alcauter, Dorothee P Auer, View ORCID ProfileEmmanuel L Barbier, View ORCID ProfileJürgen Baudewig, Christian F Beckmann, View ORCID ProfileNicolau Beckmann, View ORCID ProfileGuillaume JPC Becq, Erwin LA Blezer, Radu Bolbos, View ORCID ProfileSusann Boretius, Sandrine Bouvard, View ORCID ProfileEike Budinger, View ORCID ProfileJoseph D Buxbaum, View ORCID ProfileDiana Cash, Victoria Chapman, View ORCID ProfileKai-Hsiang Chuang, View ORCID ProfileLuisa Ciobanu, Bram Coolen, View ORCID ProfileJeffrey W Dalley, View ORCID ProfileMarc Dhenain, View ORCID ProfileRick M Dijkhuizen, View ORCID ProfileOscar Esteban, View ORCID ProfileCornelius Faber, View ORCID ProfileMarcelo Febo, View ORCID ProfileKirk W Feindel, View ORCID ProfileGianluigi Forloni, Jérémie Fouquet, View ORCID ProfileEduardo A Garza-Villarreal, View ORCID ProfileNatalia Gass, View ORCID ProfileJeffrey C Glennon, View ORCID ProfileAlessandro Gozzi, View ORCID ProfileOlli Gröhn, View ORCID ProfileAndrew Harkin, Arend Heerschap, Xavier Helluy, Kristina Herfert, Arnd Heuser, View ORCID ProfileJudith R Homberg, View ORCID ProfileDanielle J Houwing, Fahmeed Hyder, View ORCID ProfileGiovanna Diletta Ielacqua, View ORCID ProfileIleana O Jelescu, View ORCID ProfileHeidi Johansen-Berg, Gen Kaneko, Ryuta Kawashima, View ORCID ProfileShella D Keilholz, View ORCID ProfileGeorgios A Keliris, View ORCID ProfileClare Kelly, View ORCID ProfileChristian Kerskens, View ORCID ProfileJibran Y Khokhar, Peter C Kind, Jean-Baptiste Langlois, Jason P Lerch, View ORCID ProfileMonica A López-Hidalgo, Denise Manahan-Vaughan, View ORCID ProfileFabien Marchand, Rogier B Mars, Gerardo Marsella, View ORCID ProfileEdoardo Micotti, View ORCID ProfileEmma Muñoz-Moreno, Jamie Near, View ORCID ProfileThoralf Niendorf, Willem M Otte, View ORCID ProfilePatricia Pais, Wen-Ju Pan, View ORCID ProfileRoberto A Prado-Alcalá, View ORCID ProfileGina L Quirarte, View ORCID ProfileJennifer Rodger, View ORCID ProfileTim Rosenow, View ORCID ProfileCassandra Sampaio Baptista, View ORCID ProfileAlexander Sartorius, View ORCID ProfileStephen J Sawiak, Tom WJ Scheenen, View ORCID ProfileNoam Shemesh, View ORCID ProfileYen-Yu Ian Shih, View ORCID ProfileAmir Shmuel, View ORCID ProfileGuadalupe Soria, Ron Stoop, View ORCID ProfileGarth J Thompson, Sally M Till, Nick Todd, View ORCID ProfileAnnemie Van Der Linden, View ORCID ProfileAnnette van der Toorn, Geralda AF van Tilborg, Christian Vanhove, View ORCID ProfileAndor Veltien, View ORCID ProfileMarleen Verhoye, View ORCID ProfileLydia Wachsmuth, View ORCID ProfileWolfgang Weber-Fahr, Patricia Wenk, Xin Yu, Valerio Zerbi, Nanyin Zhang, Baogui B Zhang, Luc Zimmer, View ORCID ProfileGabriel A Devenyi, M Mallar Chakravarty, View ORCID ProfileAndreas Hess
doi: https://doi.org/10.1101/2022.04.27.489658
Joanes Grandjean
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
2Department for Medical Imaging, Radboud University Medical Center, PO Box 9101, Nijmegen, The Netherlands
Gabriel Desrosiers-Gregoire
3Cerebral Imaging Centre, Douglas Mental Health University Institute, 6875 Boulevard LaSalle, Verdun, Canada
4Integrated Program in Neuroscience, McGill University, Montreal, Canada
Cynthia Anckaerts
5Bio-imaging lab, University of Antwerp, Universiteitsplein 1, Antwerp, Belgium
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
Diego Angeles-Valdez
7Instituto de Neurobiología, Universidad Nacional Autónoma de México campus Juriquilla, Querétaro, Mexico
Fadi Ayad
8Biological and Biomedical Engineering, McGill University, 3775, rue University, Montreal, Canada
9McConnell Brain Imaging Centre, McGill University, 3801 University St., Montreal, Canada
10Montreal Neurological Institute, McGill University, 3801 University St., Montreal, Canada
David A Barrière
11UMR CNRS 7247 Physiologie des Comportements et de la Reproduction, Physiologie de la reproduction et des comportements, Centre National pour la Recherche Scientifique, Centre de recherche de Nouzilly, Tours, France
Ines Blockx
5Bio-imaging lab, University of Antwerp, Universiteitsplein 1, Antwerp, Belgium
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
Aleksandra B Bortel
9McConnell Brain Imaging Centre, McGill University, 3801 University St., Montreal, Canada
10Montreal Neurological Institute, McGill University, 3801 University St., Montreal, Canada
12Department of Neurology and Neurosurgery, McGill University, 3801 University St., Montreal, Canada
Margaret Broadwater
13Center for Animal MRI, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
14Neurology, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
15Biomedical Research Imaging Center, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
Beatriz M Cardoso
16Preclinical MRI, Champalimaud Research, Champalimaud Centre for the Unknown, Avenida de Brasília, Lisbon, Portugal
Marina Célestine
17Laboratoire des Maladies Neurodégénératives, Molecular Imaging Research Center (MIRCen), Université Paris-Saclay, Commissariat à l’Énergie Atomique et aux Énergies Alternatives (CEA), CNRS, 18 Route du Panorama, Fontenay-aux-Roses, France
Jorge E Chavez-Negrete
18Departamento de Neurobiología Conductual y Cognitiva, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Campus Juriquilla, Boulevard Juriquilla 3001, Querétaro, Mexico
Sangcheon Choi
19Translational Neuroimaging and Neural Control Group, High-Field Magnetic Resonance, Max Planck Institute for Biological Cybernetics, 72076, Tuebingen, Germany
20Graduate Training Centre of Neuroscience, International Max Planck Research School, University of Tuebingen, 72074, Tuebingen, Germany
Emma Christiaen
21Institute Biomedical Technology (IBiTech), Electronics and Information Systems (ELIS), Ghent University, Corneel Heymanslaan 10, Gent, Belgium
Perrin Clavijo
22Biomedical Engineering, Emory University/Georgia Institute of Technology, 1760 Haygood Dr, Atlanta, USA
Luis Colon-Perez
23Dept. of Pharmacology & Neuroscience, University of North Texas Health Science Center, 3500 Camp Bowie Blvd, Fort Worth, USA
Samuel Cramer
24Translational Neuroimaging and Systems Neuroscience Lab, Biomedical Engineering, Pennsylvania State University, W-341 Millennium Science Complex, University Park, USA
Tolomeo Daniele
25Centre for advanced biomedical imaging, University College London, London, UK
Elaine Dempsey
26Neuropsychopharmacology Research Group, School of Pharmacy and Pharmaceutical Sciences, Trinity College Dublin, Dublin, Ireland
27Trinity College Institute of Neuroscience, Trinity College Dublin, Dublin, Ireland
Yujian Diao
28CIBM Center for Biomedical Imaging, Ecole Polytechnique Fédérale de Lausanne, Route des Noyerettes, Lausanne, Switzerland
29Laboratory for Functional and Metabolic Imaging, Ecole Polytechnique Fédérale de Lausanne, Route des Noyerettes, Lausanne, Switzerland
Arno Doelemeyer
30Musculoskeletal Diseases Department, Novartis Institutes for BioMedical Research, Basel, Switzerland
David Dopfel
24Translational Neuroimaging and Systems Neuroscience Lab, Biomedical Engineering, Pennsylvania State University, W-341 Millennium Science Complex, University Park, USA
Lenka Dvořáková
31Biomedical Imaging Unit, A.I.V. Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland
Claudia Falfán-Melgoza
32Translational Imaging, Department of Neuroimaging, Central Institute of Mental Health, Medical Faculty Mannheim, University of Heidelberg, J5, Mannheim, Germany
Francisca F Fernandes
16Preclinical MRI, Champalimaud Research, Champalimaud Centre for the Unknown, Avenida de Brasília, Lisbon, Portugal
Caitlin F Fowler
8Biological and Biomedical Engineering, McGill University, 3775, rue University, Montreal, Canada
3Cerebral Imaging Centre, Douglas Mental Health University Institute, 6875 Boulevard LaSalle, Verdun, Canada
Antonio Fuentes-Ibañez
18Departamento de Neurobiología Conductual y Cognitiva, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Campus Juriquilla, Boulevard Juriquilla 3001, Querétaro, Mexico
Clément Garin
17Laboratoire des Maladies Neurodégénératives, Molecular Imaging Research Center (MIRCen), Université Paris-Saclay, Commissariat à l’Énergie Atomique et aux Énergies Alternatives (CEA), CNRS, 18 Route du Panorama, Fontenay-aux-Roses, France
Eveline Gelderman
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Carla EM Golden
33Seaver Autism Center for Research & Treatment, Department of Psychiatry, Icahn School of Medicine at Mount Sinai, 1468 Madison Avenue, New York City, USA
Chao CG Guo
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Marloes JAG Henckens
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
34Department of Neuroscience and Pharmacology, Rudolf Magnus Institute of Neuroscience, University Medical Center Utrecht, Heidelberglaan 100, Utrecht, The Netherlands
Lauren A Hennessy
35Experimental and Regenerative Neurosciences, School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, Australia
36Brain Plasticity Group, Perron Institute for Neurological and Translational Science, 8 Verdun Street, Nedlands, Australia
Peter Herman
37Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, USA
38Quantitative Neuroscience with Magnetic Resonance (QNMR) Core Center, Yale University School of Medicine, New Haven, USA
Nita Hofwijks
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Corey Horien
37Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, USA
Tudor M Ionescu
39Werner Siemens Imaging Center, Department of Preclinical Imaging and Radiopharmacy, University of Tuebingen, Tuebingen, Germany
Jolyon Jones
40Department of Psychology, University of Cambridge, Downing Street, Cambridge, UK
Johannes Kaesser
41Institute of Experimental and Clinical Pharmacology and Toxicology, FAU Erlangen-Nürnberg, Fahrstrasse 17, 91054 Erlangen, Germany
Eugene Kim
42Biomarker Research And Imaging in Neuroscience (BRAIN) Centre, Department of Neuroimaging, King’s College London, Coldharbour Lane, London, UK
Henriette Lambers
43Experimental Magnetic Resonance Group, Clinic of Radiology, University Hospital Münster, Albert-Schweitzer-Campus 1, Muenster, Germany
Alberto Lazari
44Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, John Radcliffe Hospital, Headington, OX3 9DU, Oxford, UK
Sung-Ho Lee
13Center for Animal MRI, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
14Neurology, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
15Biomedical Research Imaging Center, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
Amanda Lillywhite
45School of Life Sciences, University of Nottingham, Nottingham, UK
46Pain Centre Versus Arthritis, University of Nottingham, Nottingham, UK
Yikang Liu
24Translational Neuroimaging and Systems Neuroscience Lab, Biomedical Engineering, Pennsylvania State University, W-341 Millennium Science Complex, University Park, USA
Yanyan Y Liu
47Brainnetome CenterBrainnetome Center, Institute of Automation, Chinese Academy of Sciences, Zhongguancun East Road, Beijing, China
Alejandra López-Castro
7Instituto de Neurobiología, Universidad Nacional Autónoma de México campus Juriquilla, Querétaro, Mexico
Xavier López-Gil
48Magnetic Imaging Resonance Core Facility, Institut d’Investigacions Biomèdiques August Pi I Sunyer (IDIBAPS), Rosselló, 149-153, Barcelona, Spain
Zilu Ma
24Translational Neuroimaging and Systems Neuroscience Lab, Biomedical Engineering, Pennsylvania State University, W-341 Millennium Science Complex, University Park, USA
Eilidh MacNicol
42Biomarker Research And Imaging in Neuroscience (BRAIN) Centre, Department of Neuroimaging, King’s College London, Coldharbour Lane, London, UK
Dan Madularu
8Biological and Biomedical Engineering, McGill University, 3775, rue University, Montreal, Canada
49Center for Translational Neuroimaging, Northeastern University, 360 Huntington Avenue, Boston, USA
Francesca Mandino
37Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, USA
Sabina Marciano
39Werner Siemens Imaging Center, Department of Preclinical Imaging and Radiopharmacy, University of Tuebingen, Tuebingen, Germany
Matthew J McAuslan
26Neuropsychopharmacology Research Group, School of Pharmacy and Pharmaceutical Sciences, Trinity College Dublin, Dublin, Ireland
Patrick McCunn
50Khokhar Lab, Department of Biomedical Sciences, University of Guelph, 50 Stone Rd E, Guelph, Canada
Alison McIntosh
26Neuropsychopharmacology Research Group, School of Pharmacy and Pharmaceutical Sciences, Trinity College Dublin, Dublin, Ireland
27Trinity College Institute of Neuroscience, Trinity College Dublin, Dublin, Ireland
Xianzong Meng
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Lisa Meyer-Baese
22Biomedical Engineering, Emory University/Georgia Institute of Technology, 1760 Haygood Dr, Atlanta, USA
Stephan Missault
5Bio-imaging lab, University of Antwerp, Universiteitsplein 1, Antwerp, Belgium
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
Federico Moro
51Laboratory of Acute Brain Injury and Therapeutic Strategies, Neuroscience, Istituto di Ricerche Farmacologiche Mario Negri, IRCCS, via Mario Negri 2, Milan, Italy
Daphne Naessens
52Biomedical Engineering and Physics, Amsterdam UMC location University of Amsterdam, Amsterdam, The Netherlands
Laura J Nava-Gomez
53Facultad de Medicina, Universidad Autónoma de Querétaro, Querétaro, Mexico
54Escuela Nacional de Estudios Superiores unidad Juriquilla, Universidad Nacional Autónoma de México, Boulevard Juriquilla 3001, Querétaro, Mexico
Hiroi Nonaka
55Institute of Development, Aging and Cancer, Tohoku University, 4-1 Seiryo-machi, Aoba-ku, Sendai, Japan
Juan J Ortiz
18Departamento de Neurobiología Conductual y Cognitiva, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Campus Juriquilla, Boulevard Juriquilla 3001, Querétaro, Mexico
Jaakko Paasonen
31Biomedical Imaging Unit, A.I.V. Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland
Lore M Peeters
5Bio-imaging lab, University of Antwerp, Universiteitsplein 1, Antwerp, Belgium
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
Mickaël Pereira
56Lyon Neuroscience Research Center, Université Claude Bernard Lyon 1, INSERM, CNRS, Lyon, France
Pablo D Perez
24Translational Neuroimaging and Systems Neuroscience Lab, Biomedical Engineering, Pennsylvania State University, W-341 Millennium Science Complex, University Park, USA
Marjory Pompilus
57Febo Laboratory, Psychiatry, University of Florida, 1149 S. Newell Drive, Gainesville, United States
Malcolm Prior
58School of Medicine, University of Nottingham, Nottingham, UK
Rustam Rakhmatullin
59Comparative Medicine Unit, Trinity College Dublin, Dublin, Ireland
Henning M Reimann
60Berlin Ultrahigh Field Facility (B.U.F.F.), Max-Delbrück Center for Molecular Medicine in the Helmholtz Association, Robert-Rössle-Str. 10, Berlin, Germany
Jonathan Reinwald
61Translational Imaging, Department of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, University of Heidelberg, J5, Mannheim, Germany
Rodrigo Triana de Rio
62Psychiatric neurosciences, Center for Psychiatric Neuroscience, Lausanne University and University Hospital Center, Unicentre, Lausanne, Switzerland
Alejandro Rivera-Olvera
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Daniel Ruiz-Pérez
59Comparative Medicine Unit, Trinity College Dublin, Dublin, Ireland
Gabriele Russo
63Department of Neurophysiology, Medical Faculty, Ruhr University Bochum, Universitätsstraße 150, Bochum, Germany
Tobias J Rutten
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Rie Ryoke
55Institute of Development, Aging and Cancer, Tohoku University, 4-1 Seiryo-machi, Aoba-ku, Sendai, Japan
Markus Sack
32Translational Imaging, Department of Neuroimaging, Central Institute of Mental Health, Medical Faculty Mannheim, University of Heidelberg, J5, Mannheim, Germany
Piergiorgio Salvan
44Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, John Radcliffe Hospital, Headington, OX3 9DU, Oxford, UK
Basavaraju G Sanganahalli
37Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, USA
38Quantitative Neuroscience with Magnetic Resonance (QNMR) Core Center, Yale University School of Medicine, New Haven, USA
Aileen Schroeter
64Institute for Biomedical Engineering, University and ETH Zurich, Wolfgang-Pauli-Str. 27, Zurich, Switzerland
Bhedita J Seewoo
35Experimental and Regenerative Neurosciences, School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, Australia
36Brain Plasticity Group, Perron Institute for Neurological and Translational Science, 8 Verdun Street, Nedlands, Australia
65Centre for Microscopy, Characterisation & Analysis, Research Infrastructure Centres, The University of Western Australia, 6 Verdun Street, Nedlands, Australia
Erwan Selingue
66NeuroSpin, CEA Saclay, Paris, France
Aline Seuwen
64Institute for Biomedical Engineering, University and ETH Zurich, Wolfgang-Pauli-Str. 27, Zurich, Switzerland
Bowen Shi
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
67iHuman Institute, ShanghaiTech University, Shanghai, China
Nikoloz Sirmpilatze
68Functional Imaging Laboratory, German Primate Center - Leibniz Institute for Primate Research, Kellnerweg 4, Göttingen, Germany
69Faculty of Biology and Psychology, Georg-August University of Göttingen, Göttingen, Germany
70DFG Research Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB), Göttingen, Germany
Joanna AB Smith
71Simons Initiative for the Developing Brain, The University of Edinburgh, Edinburgh, UK
72Patrick Wild Centre, The University of Edinburgh, Edinburgh, UK
73Centre for Discovery Brain Sciences, The University of Edinburgh, Edinburgh, UK
Corrie Smith
22Biomedical Engineering, Emory University/Georgia Institute of Technology, 1760 Haygood Dr, Atlanta, USA
Filip Sobczak
19Translational Neuroimaging and Neural Control Group, High-Field Magnetic Resonance, Max Planck Institute for Biological Cybernetics, 72076, Tuebingen, Germany
20Graduate Training Centre of Neuroscience, International Max Planck Research School, University of Tuebingen, 72074, Tuebingen, Germany
Petteri J Stenroos
74Grenoble Institut Neurosciences, Univ. Grenoble Alpes, CNRS, Grenoble, France
Milou Straathof
75Biomedical MR Imaging and Spectroscopy Group, Center for Image Sciences, University Medical Center Utrecht & Utrecht University, Yalelaan 2, Utrecht, The Netherlands
Sandra Strobelt
41Institute of Experimental and Clinical Pharmacology and Toxicology, FAU Erlangen-Nürnberg, Fahrstrasse 17, 91054 Erlangen, Germany
Akira Sumiyoshi
55Institute of Development, Aging and Cancer, Tohoku University, 4-1 Seiryo-machi, Aoba-ku, Sendai, Japan
76National Institutes for Quantum Science and Technology, 4-9-1 Anagawa, Inage-ku, Chiba, Japan
Kengo Takahashi
19Translational Neuroimaging and Neural Control Group, High-Field Magnetic Resonance, Max Planck Institute for Biological Cybernetics, 72076, Tuebingen, Germany
20Graduate Training Centre of Neuroscience, International Max Planck Research School, University of Tuebingen, 72074, Tuebingen, Germany
Maria E Torres-García
18Departamento de Neurobiología Conductual y Cognitiva, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Campus Juriquilla, Boulevard Juriquilla 3001, Querétaro, Mexico
Raul Tudela
77Group of Biomedical Imaging, Consorcio Centro de Investigación Biomédica en Red (CIBER) de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), University of Barcelona, Barcelona, Spain
Monica van den Berg
5Bio-imaging lab, University of Antwerp, Universiteitsplein 1, Antwerp, Belgium
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
Kajo van der Marel
75Biomedical MR Imaging and Spectroscopy Group, Center for Image Sciences, University Medical Center Utrecht & Utrecht University, Yalelaan 2, Utrecht, The Netherlands
Aran TB van Hout
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Roberta Vertullo
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Benjamin Vidal
56Lyon Neuroscience Research Center, Université Claude Bernard Lyon 1, INSERM, CNRS, Lyon, France
Roel M Vrooman
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Victora X Wang
78BioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, 1470 Madison Avenue, New York City, USA
Isabel Wank
41Institute of Experimental and Clinical Pharmacology and Toxicology, FAU Erlangen-Nürnberg, Fahrstrasse 17, 91054 Erlangen, Germany
David JG Watson
45School of Life Sciences, University of Nottingham, Nottingham, UK
Ting Yin
79Animal Imaging and Technology Section, Center for Biomedical Imaging, École polytechnique fédérale de Lausanne, Route Cantonale, Lausanne, Switzerland
Yongzhi Zhang
80Focused Ultrasound Laboratory, Radiology, Brigham and Women’s Hospital, 221 Longwood Ave, Boston, USA
Stefan Zurbruegg
81Neurosciences Department, Novartis Institutes for BioMedical Research, Basel, Switzerland
Sophie Achard
82Inria, Univ. Grenoble Alpes, CNRS, Grenoble, France
Sarael Alcauter
18Departamento de Neurobiología Conductual y Cognitiva, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Campus Juriquilla, Boulevard Juriquilla 3001, Querétaro, Mexico
Dorothee P Auer
83NIHR Biomedical Research Centre, University of Nottingham, Nottingham, UK
58School of Medicine, University of Nottingham, Nottingham, UK
Emmanuel L Barbier
74Grenoble Institut Neurosciences, Univ. Grenoble Alpes, CNRS, Grenoble, France
Jürgen Baudewig
68Functional Imaging Laboratory, German Primate Center - Leibniz Institute for Primate Research, Kellnerweg 4, Göttingen, Germany
Christian F Beckmann
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
44Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, John Radcliffe Hospital, Headington, OX3 9DU, Oxford, UK
Nicolau Beckmann
30Musculoskeletal Diseases Department, Novartis Institutes for BioMedical Research, Basel, Switzerland
Guillaume JPC Becq
84Gipsa-lab, Univ. Grenoble Alpes, CNRS, Grenoble, France
Erwin LA Blezer
75Biomedical MR Imaging and Spectroscopy Group, Center for Image Sciences, University Medical Center Utrecht & Utrecht University, Yalelaan 2, Utrecht, The Netherlands
Radu Bolbos
85CERMEP - Imagerie du vivant, Lyon, France
Susann Boretius
68Functional Imaging Laboratory, German Primate Center - Leibniz Institute for Primate Research, Kellnerweg 4, Göttingen, Germany
69Faculty of Biology and Psychology, Georg-August University of Göttingen, Göttingen, Germany
70DFG Research Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB), Göttingen, Germany
Sandrine Bouvard
56Lyon Neuroscience Research Center, Université Claude Bernard Lyon 1, INSERM, CNRS, Lyon, France
Eike Budinger
86Combinatorial NeuroImaging Core Facility, Leibniz Institute for Neurobiology, Brenneckestreet 6, Magdeburg, Germany
87Center for Behavioral Brain Sciences, Universitaetsplatz 2, Magdeburg, Germany
Joseph D Buxbaum
33Seaver Autism Center for Research & Treatment, Department of Psychiatry, Icahn School of Medicine at Mount Sinai, 1468 Madison Avenue, New York City, USA
Diana Cash
42Biomarker Research And Imaging in Neuroscience (BRAIN) Centre, Department of Neuroimaging, King’s College London, Coldharbour Lane, London, UK
Victoria Chapman
45School of Life Sciences, University of Nottingham, Nottingham, UK
46Pain Centre Versus Arthritis, University of Nottingham, Nottingham, UK
83NIHR Biomedical Research Centre, University of Nottingham, Nottingham, UK
76National Institutes for Quantum Science and Technology, 4-9-1 Anagawa, Inage-ku, Chiba, Japan
Kai-Hsiang Chuang
88Queensland Brain Institute and Centre for Advanced Imaging, Univeristy of Queensland, Building 79, St Lucia, Australia
Luisa Ciobanu
66NeuroSpin, CEA Saclay, Paris, France
Bram Coolen
52Biomedical Engineering and Physics, Amsterdam UMC location University of Amsterdam, Amsterdam, The Netherlands
Jeffrey W Dalley
40Department of Psychology, University of Cambridge, Downing Street, Cambridge, UK
Marc Dhenain
17Laboratoire des Maladies Neurodégénératives, Molecular Imaging Research Center (MIRCen), Université Paris-Saclay, Commissariat à l’Énergie Atomique et aux Énergies Alternatives (CEA), CNRS, 18 Route du Panorama, Fontenay-aux-Roses, France
Rick M Dijkhuizen
75Biomedical MR Imaging and Spectroscopy Group, Center for Image Sciences, University Medical Center Utrecht & Utrecht University, Yalelaan 2, Utrecht, The Netherlands
Oscar Esteban
89Centre de recherche en radiologie, Centre Hospitalier Universitaire Vaudois, Rue Centrale 7, Lausanne, Switzerland
Cornelius Faber
43Experimental Magnetic Resonance Group, Clinic of Radiology, University Hospital Münster, Albert-Schweitzer-Campus 1, Muenster, Germany
Marcelo Febo
57Febo Laboratory, Psychiatry, University of Florida, 1149 S. Newell Drive, Gainesville, United States
Kirk W Feindel
65Centre for Microscopy, Characterisation & Analysis, Research Infrastructure Centres, The University of Western Australia, 6 Verdun Street, Nedlands, Australia
Gianluigi Forloni
90Biology of Neurodogenerative Disorders, Neuroscience, Istituto di Ricerche Farmacologiche Mario Negri, IRCCS, via Mario Negri 2, Milan, Italy
Jérémie Fouquet
3Cerebral Imaging Centre, Douglas Mental Health University Institute, 6875 Boulevard LaSalle, Verdun, Canada
Eduardo A Garza-Villarreal
7Instituto de Neurobiología, Universidad Nacional Autónoma de México campus Juriquilla, Querétaro, Mexico
Natalia Gass
32Translational Imaging, Department of Neuroimaging, Central Institute of Mental Health, Medical Faculty Mannheim, University of Heidelberg, J5, Mannheim, Germany
Jeffrey C Glennon
91Conway Institute of Biomedical and Biomolecular Sciences, School of Medicine, University College Dublin, Dublin, Ireland
Alessandro Gozzi
92Functional Neuroimaging Laboratory, Center for Neuroscience and Cognitive systems, Istituto Italiano di Tecnologia, Rovereto, Italy
Olli Gröhn
31Biomedical Imaging Unit, A.I.V. Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland
Andrew Harkin
26Neuropsychopharmacology Research Group, School of Pharmacy and Pharmaceutical Sciences, Trinity College Dublin, Dublin, Ireland
27Trinity College Institute of Neuroscience, Trinity College Dublin, Dublin, Ireland
Arend Heerschap
2Department for Medical Imaging, Radboud University Medical Center, PO Box 9101, Nijmegen, The Netherlands
Xavier Helluy
63Department of Neurophysiology, Medical Faculty, Ruhr University Bochum, Universitätsstraße 150, Bochum, Germany
93Department of Biopsychology, Institute of Cognitive Neuroscience, Ruhr University Bochum, Universitätsstraße 150, Bochum, Germany
Kristina Herfert
39Werner Siemens Imaging Center, Department of Preclinical Imaging and Radiopharmacy, University of Tuebingen, Tuebingen, Germany
Arnd Heuser
94Max-Delbrück Center for Molecular Medicine in the Helmholtz Association, Robert-Rössle-Straße 10, Haus 90, Berlin, Germany
Judith R Homberg
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Danielle J Houwing
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
Fahmeed Hyder
37Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, USA
38Quantitative Neuroscience with Magnetic Resonance (QNMR) Core Center, Yale University School of Medicine, New Haven, USA
Giovanna Diletta Ielacqua
94Max-Delbrück Center for Molecular Medicine in the Helmholtz Association, Robert-Rössle-Straße 10, Haus 90, Berlin, Germany
Ileana O Jelescu
28CIBM Center for Biomedical Imaging, Ecole Polytechnique Fédérale de Lausanne, Route des Noyerettes, Lausanne, Switzerland
Heidi Johansen-Berg
44Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, John Radcliffe Hospital, Headington, OX3 9DU, Oxford, UK
Gen Kaneko
95School of Arts & Sciences, University of Houston-Victoria, Victoria, USA
Ryuta Kawashima
55Institute of Development, Aging and Cancer, Tohoku University, 4-1 Seiryo-machi, Aoba-ku, Sendai, Japan
Shella D Keilholz
22Biomedical Engineering, Emory University/Georgia Institute of Technology, 1760 Haygood Dr, Atlanta, USA
Georgios A Keliris
5Bio-imaging lab, University of Antwerp, Universiteitsplein 1, Antwerp, Belgium
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
Clare Kelly
27Trinity College Institute of Neuroscience, Trinity College Dublin, Dublin, Ireland
96School of Psychology, Trinity College Dublin, Dublin, Ireland
97Department of Psychiatry at the School of Medicine, Trinity College Dublin, Dublin, Ireland
Christian Kerskens
27Trinity College Institute of Neuroscience, Trinity College Dublin, Dublin, Ireland
98Trinity Centre for Biomedical Engineering, School of Medicine, Trinity College Dublin, Dublin 2, Ireland
Jibran Y Khokhar
50Khokhar Lab, Department of Biomedical Sciences, University of Guelph, 50 Stone Rd E, Guelph, Canada
Peter C Kind
71Simons Initiative for the Developing Brain, The University of Edinburgh, Edinburgh, UK
72Patrick Wild Centre, The University of Edinburgh, Edinburgh, UK
73Centre for Discovery Brain Sciences, The University of Edinburgh, Edinburgh, UK
99Centre for Brain Development and Repair, Institute for Stem Cell Biology and Regenerative Medicine, Bangalore, India
Jean-Baptiste Langlois
85CERMEP - Imagerie du vivant, Lyon, France
Jason P Lerch
44Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, John Radcliffe Hospital, Headington, OX3 9DU, Oxford, UK
100Department of Medical Biophysics, University of Toronto, Toronto, Canada
Monica A López-Hidalgo
54Escuela Nacional de Estudios Superiores unidad Juriquilla, Universidad Nacional Autónoma de México, Boulevard Juriquilla 3001, Querétaro, Mexico
Denise Manahan-Vaughan
63Department of Neurophysiology, Medical Faculty, Ruhr University Bochum, Universitätsstraße 150, Bochum, Germany
Fabien Marchand
101UMR/INSERM Neurodol, Pharmacologie Médicale, Universté Clermont Auvergne (UCA), Faculté de médecine et de pharmacie 28, place Henri Dunant, 63001 Clermont-Ferrand cedex, France
Rogier B Mars
1Donders Institute for Brain, Behaviour, and Cognition, Nijmegen, The Netherlands
44Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, John Radcliffe Hospital, Headington, OX3 9DU, Oxford, UK
Gerardo Marsella
102Animal Care Unit, Istituto di Ricerche Farmacologiche Mario Negri, IRCCS, via Mario Negri 2, Milan, Italy
Edoardo Micotti
90Biology of Neurodogenerative Disorders, Neuroscience, Istituto di Ricerche Farmacologiche Mario Negri, IRCCS, via Mario Negri 2, Milan, Italy
Emma Muñoz-Moreno
48Magnetic Imaging Resonance Core Facility, Institut d’Investigacions Biomèdiques August Pi I Sunyer (IDIBAPS), Rosselló, 149-153, Barcelona, Spain
Jamie Near
3Cerebral Imaging Centre, Douglas Mental Health University Institute, 6875 Boulevard LaSalle, Verdun, Canada
103Physical Sciences Platform, Sunnybrook Research Institute, 2075 Bayview Avenue, Toronto, Canada
Thoralf Niendorf
60Berlin Ultrahigh Field Facility (B.U.F.F.), Max-Delbrück Center for Molecular Medicine in the Helmholtz Association, Robert-Rössle-Str. 10, Berlin, Germany
104Experimental and Clinical Research Center, A Joint Cooperation Between the Charité Medical Faculty and the Max-Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany
Willem M Otte
75Biomedical MR Imaging and Spectroscopy Group, Center for Image Sciences, University Medical Center Utrecht & Utrecht University, Yalelaan 2, Utrecht, The Netherlands
105Department of Pediatric Neurology, UMC Utrecht Brain Center, University Medical Center Utrecht & Utrecht University, Heidelberglaan 100, Utrecht, The Netherlands
Patricia Pais
19Translational Neuroimaging and Neural Control Group, High-Field Magnetic Resonance, Max Planck Institute for Biological Cybernetics, 72076, Tuebingen, Germany
106Medical Imaging Physics (INM-4), Institute of Neuroscience and Medicine, Forschungszentrum Juelich, 52428, Juellich, Germany
Wen-Ju Pan
22Biomedical Engineering, Emory University/Georgia Institute of Technology, 1760 Haygood Dr, Atlanta, USA
Roberto A Prado-Alcalá
18Departamento de Neurobiología Conductual y Cognitiva, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Campus Juriquilla, Boulevard Juriquilla 3001, Querétaro, Mexico
Gina L Quirarte
18Departamento de Neurobiología Conductual y Cognitiva, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Campus Juriquilla, Boulevard Juriquilla 3001, Querétaro, Mexico
Jennifer Rodger
35Experimental and Regenerative Neurosciences, School of Biological Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, Australia
36Brain Plasticity Group, Perron Institute for Neurological and Translational Science, 8 Verdun Street, Nedlands, Australia
Tim Rosenow
107Centre for Microscopy, Characterisation and Analysis, The University of Western Australia, 35 Stirling Highway, Crawley, Australia
Cassandra Sampaio Baptista
44Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford, John Radcliffe Hospital, Headington, OX3 9DU, Oxford, UK
Alexander Sartorius
61Translational Imaging, Department of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, University of Heidelberg, J5, Mannheim, Germany
Stephen J Sawiak
108Translational Neuroimaging Laboratory, Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge, UK
Tom WJ Scheenen
2Department for Medical Imaging, Radboud University Medical Center, PO Box 9101, Nijmegen, The Netherlands
109Erwin L. Hahn Institute for MR Imaging, University of Duisburg-Essen, Essen, Germany
Noam Shemesh
16Preclinical MRI, Champalimaud Research, Champalimaud Centre for the Unknown, Avenida de Brasília, Lisbon, Portugal
Yen-Yu Ian Shih
13Center for Animal MRI, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
14Neurology, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
15Biomedical Research Imaging Center, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
110Biomedical Engineering, The University of North Carolina at Chapel Hill, 125 Mason Farm Rd., Chapel Hill, USA
Amir Shmuel
8Biological and Biomedical Engineering, McGill University, 3775, rue University, Montreal, Canada
9McConnell Brain Imaging Centre, McGill University, 3801 University St., Montreal, Canada
10Montreal Neurological Institute, McGill University, 3801 University St., Montreal, Canada
12Department of Neurology and Neurosurgery, McGill University, 3801 University St., Montreal, Canada
111Department of Physiology, McGill University, 3801 University St., Montreal, Canada
Guadalupe Soria
112Laboratory of Surgical Neuroanatomy, Institute of Neuroscience, University of Barcelona, Casanova, 143, Barcelona, Spain
Ron Stoop
62Psychiatric neurosciences, Center for Psychiatric Neuroscience, Lausanne University and University Hospital Center, Unicentre, Lausanne, Switzerland
Garth J Thompson
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
67iHuman Institute, ShanghaiTech University, Shanghai, China
Sally M Till
71Simons Initiative for the Developing Brain, The University of Edinburgh, Edinburgh, UK
72Patrick Wild Centre, The University of Edinburgh, Edinburgh, UK
73Centre for Discovery Brain Sciences, The University of Edinburgh, Edinburgh, UK
Nick Todd
80Focused Ultrasound Laboratory, Radiology, Brigham and Women’s Hospital, 221 Longwood Ave, Boston, USA
Annemie Van Der Linden
5Bio-imaging lab, University of Antwerp, Universiteitsplein 1, Antwerp, Belgium
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
Annette van der Toorn
75Biomedical MR Imaging and Spectroscopy Group, Center for Image Sciences, University Medical Center Utrecht & Utrecht University, Yalelaan 2, Utrecht, The Netherlands
Geralda AF van Tilborg
75Biomedical MR Imaging and Spectroscopy Group, Center for Image Sciences, University Medical Center Utrecht & Utrecht University, Yalelaan 2, Utrecht, The Netherlands
Christian Vanhove
21Institute Biomedical Technology (IBiTech), Electronics and Information Systems (ELIS), Ghent University, Corneel Heymanslaan 10, Gent, Belgium
Andor Veltien
2Department for Medical Imaging, Radboud University Medical Center, PO Box 9101, Nijmegen, The Netherlands
Marleen Verhoye
5Bio-imaging lab, University of Antwerp, Universiteitsplein 1, Antwerp, Belgium
6μNEURO Research Centre of Excellence,, University of Antwerp, Antwerp, Belgium
Lydia Wachsmuth
43Experimental Magnetic Resonance Group, Clinic of Radiology, University Hospital Münster, Albert-Schweitzer-Campus 1, Muenster, Germany
Wolfgang Weber-Fahr
32Translational Imaging, Department of Neuroimaging, Central Institute of Mental Health, Medical Faculty Mannheim, University of Heidelberg, J5, Mannheim, Germany
Patricia Wenk
86Combinatorial NeuroImaging Core Facility, Leibniz Institute for Neurobiology, Brenneckestreet 6, Magdeburg, Germany
Xin Yu
19Translational Neuroimaging and Neural Control Group, High-Field Magnetic Resonance, Max Planck Institute for Biological Cybernetics, 72076, Tuebingen, Germany
113Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, MA 02129, Charlestown, USA
Valerio Zerbi
114Department of Health Sciences and Technology, ETH Zurich, Wolfgang-Pauli-Str. 27, Zurich, Switzerland
115Neuroscience Center Zürich, ETH Zürich and University of Zürich, Zürich, Switzerland
Nanyin Zhang
24Translational Neuroimaging and Systems Neuroscience Lab, Biomedical Engineering, Pennsylvania State University, W-341 Millennium Science Complex, University Park, USA
Baogui B Zhang
47Brainnetome CenterBrainnetome Center, Institute of Automation, Chinese Academy of Sciences, Zhongguancun East Road, Beijing, China
Luc Zimmer
85CERMEP - Imagerie du vivant, Lyon, France
56Lyon Neuroscience Research Center, Université Claude Bernard Lyon 1, INSERM, CNRS, Lyon, France
116Hospices Civils de Lyon, Lyon, France
Gabriel A Devenyi
3Cerebral Imaging Centre, Douglas Mental Health University Institute, 6875 Boulevard LaSalle, Verdun, Canada
117Department of Psychiatry, McGill University, 1033 Pine Avenue West, Montreal, Canada
M Mallar Chakravarty
8Biological and Biomedical Engineering, McGill University, 3775, rue University, Montreal, Canada
3Cerebral Imaging Centre, Douglas Mental Health University Institute, 6875 Boulevard LaSalle, Verdun, Canada
117Department of Psychiatry, McGill University, 1033 Pine Avenue West, Montreal, Canada
Andreas Hess
41Institute of Experimental and Clinical Pharmacology and Toxicology, FAU Erlangen-Nürnberg, Fahrstrasse 17, 91054 Erlangen, Germany
Abstract
Task-free functional connectivity in animal models provides an experimental framework to examine connectivity phenomena under controlled conditions and allows comparison with invasive or terminal procedures. To date, animal acquisitions are performed with varying protocols and analyses that hamper result comparison and integration. We introduce StandardRat, a consensus rat functional MRI acquisition protocol tested across 20 centers. To develop this protocol with optimized acquisition and processing parameters, we initially aggregated 65 functional imaging datasets acquired in rats from 46 centers. We developed a reproducible pipeline for the analysis of rat data acquired with diverse protocols and determined experimental and processing parameters associated with a more robust functional connectivity detection. We show that the standardized protocol enhances biologically plausible functional connectivity patterns, relative to pre-existing acquisitions. The protocol and processing pipeline described here are openly shared with the neuroimaging community to promote interoperability and cooperation towards tackling the most important challenges in neuroscience.
Competing Interest Statement
Aline Seuwen is an employee of Bruker, the manufacturer of preclinical MRI systems used for the acquisition of the majority of the datasets in this collection. Emmanuel L. Barbier is a consultant for Bruker. Benjamin Vidal is an employee of Theranexus company. Stefan Zurbruegg, Arno Doelemeyer, and Nicolau Beckmann are employees of Novartis Pharma AG. Thoralf Niendorf is founder and CEO of MRI.TOOLS GmbH.
Footnotes
Copyright
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
Posted April 28, 2022.
StandardRat: A multi-center consensus protocol to enhance functional connectivity specificity in the rat brain
Joanes Grandjean, Gabriel Desrosiers-Gregoire, Cynthia Anckaerts, Diego Angeles-Valdez, Fadi Ayad, David A Barrière, Ines Blockx, Aleksandra B Bortel, Margaret Broadwater, Beatriz M Cardoso, Marina Célestine, Jorge E Chavez-Negrete, Sangcheon Choi, Emma Christiaen, Perrin Clavijo, Luis Colon-Perez, Samuel Cramer, Tolomeo Daniele, Elaine Dempsey, Yujian Diao, Arno Doelemeyer, David Dopfel, Lenka Dvořáková, Claudia Falfán-Melgoza, Francisca F Fernandes, Caitlin F Fowler, Antonio Fuentes-Ibañez, Clément Garin, Eveline Gelderman, Carla EM Golden, Chao CG Guo, Marloes JAG Henckens, Lauren A Hennessy, Peter Herman, Nita Hofwijks, Corey Horien, Tudor M Ionescu, Jolyon Jones, Johannes Kaesser, Eugene Kim, Henriette Lambers, Alberto Lazari, Sung-Ho Lee, Amanda Lillywhite, Yikang Liu, Yanyan Y Liu, Alejandra López-Castro, Xavier López-Gil, Zilu Ma, Eilidh MacNicol, Dan Madularu, Francesca Mandino, Sabina Marciano, Matthew J McAuslan, Patrick McCunn, Alison McIntosh, Xianzong Meng, Lisa Meyer-Baese, Stephan Missault, Federico Moro, Daphne Naessens, Laura J Nava-Gomez, Hiroi Nonaka, Juan J Ortiz, Jaakko Paasonen, Lore M Peeters, Mickaël Pereira, Pablo D Perez, Marjory Pompilus, Malcolm Prior, Rustam Rakhmatullin, Henning M Reimann, Jonathan Reinwald, Rodrigo Triana de Rio, Alejandro Rivera-Olvera, Daniel Ruiz-Pérez, Gabriele Russo, Tobias J Rutten, Rie Ryoke, Markus Sack, Piergiorgio Salvan, Basavaraju G Sanganahalli, Aileen Schroeter, Bhedita J Seewoo, Erwan Selingue, Aline Seuwen, Bowen Shi, Nikoloz Sirmpilatze, Joanna AB Smith, Corrie Smith, Filip Sobczak, Petteri J Stenroos, Milou Straathof, Sandra Strobelt, Akira Sumiyoshi, Kengo Takahashi, Maria E Torres-García, Raul Tudela, Monica van den Berg, Kajo van der Marel, Aran TB van Hout, Roberta Vertullo, Benjamin Vidal, Roel M Vrooman, Victora X Wang, Isabel Wank, David JG Watson, Ting Yin, Yongzhi Zhang, Stefan Zurbruegg, Sophie Achard, Sarael Alcauter, Dorothee P Auer, Emmanuel L Barbier, Jürgen Baudewig, Christian F Beckmann, Nicolau Beckmann, Guillaume JPC Becq, Erwin LA Blezer, Radu Bolbos, Susann Boretius, Sandrine Bouvard, Eike Budinger, Joseph D Buxbaum, Diana Cash, Victoria Chapman, Kai-Hsiang Chuang, Luisa Ciobanu, Bram Coolen, Jeffrey W Dalley, Marc Dhenain, Rick M Dijkhuizen, Oscar Esteban, Cornelius Faber, Marcelo Febo, Kirk W Feindel, Gianluigi Forloni, Jérémie Fouquet, Eduardo A Garza-Villarreal, Natalia Gass, Jeffrey C Glennon, Alessandro Gozzi, Olli Gröhn, Andrew Harkin, Arend Heerschap, Xavier Helluy, Kristina Herfert, Arnd Heuser, Judith R Homberg, Danielle J Houwing, Fahmeed Hyder, Giovanna Diletta Ielacqua, Ileana O Jelescu, Heidi Johansen-Berg, Gen Kaneko, Ryuta Kawashima, Shella D Keilholz, Georgios A Keliris, Clare Kelly, Christian Kerskens, Jibran Y Khokhar, Peter C Kind, Jean-Baptiste Langlois, Jason P Lerch, Monica A López-Hidalgo, Denise Manahan-Vaughan, Fabien Marchand, Rogier B Mars, Gerardo Marsella, Edoardo Micotti, Emma Muñoz-Moreno, Jamie Near, Thoralf Niendorf, Willem M Otte, Patricia Pais, Wen-Ju Pan, Roberto A Prado-Alcalá, Gina L Quirarte, Jennifer Rodger, Tim Rosenow, Cassandra Sampaio Baptista, Alexander Sartorius, Stephen J Sawiak, Tom WJ Scheenen, Noam Shemesh, Yen-Yu Ian Shih, Amir Shmuel, Guadalupe Soria, Ron Stoop, Garth J Thompson, Sally M Till, Nick Todd, Annemie Van Der Linden, Annette van der Toorn, Geralda AF van Tilborg, Christian Vanhove, Andor Veltien, Marleen Verhoye, Lydia Wachsmuth, Wolfgang Weber-Fahr, Patricia Wenk, Xin Yu, Valerio Zerbi, Nanyin Zhang, Baogui B Zhang, Luc Zimmer, Gabriel A Devenyi, M Mallar Chakravarty, Andreas Hess
bioRxiv 2022.04.27.489658; doi: https://doi.org/10.1101/2022.04.27.489658
StandardRat: A multi-center consensus protocol to enhance functional connectivity specificity in the rat brain
Joanes Grandjean, Gabriel Desrosiers-Gregoire, Cynthia Anckaerts, Diego Angeles-Valdez, Fadi Ayad, David A Barrière, Ines Blockx, Aleksandra B Bortel, Margaret Broadwater, Beatriz M Cardoso, Marina Célestine, Jorge E Chavez-Negrete, Sangcheon Choi, Emma Christiaen, Perrin Clavijo, Luis Colon-Perez, Samuel Cramer, Tolomeo Daniele, Elaine Dempsey, Yujian Diao, Arno Doelemeyer, David Dopfel, Lenka Dvořáková, Claudia Falfán-Melgoza, Francisca F Fernandes, Caitlin F Fowler, Antonio Fuentes-Ibañez, Clément Garin, Eveline Gelderman, Carla EM Golden, Chao CG Guo, Marloes JAG Henckens, Lauren A Hennessy, Peter Herman, Nita Hofwijks, Corey Horien, Tudor M Ionescu, Jolyon Jones, Johannes Kaesser, Eugene Kim, Henriette Lambers, Alberto Lazari, Sung-Ho Lee, Amanda Lillywhite, Yikang Liu, Yanyan Y Liu, Alejandra López-Castro, Xavier López-Gil, Zilu Ma, Eilidh MacNicol, Dan Madularu, Francesca Mandino, Sabina Marciano, Matthew J McAuslan, Patrick McCunn, Alison McIntosh, Xianzong Meng, Lisa Meyer-Baese, Stephan Missault, Federico Moro, Daphne Naessens, Laura J Nava-Gomez, Hiroi Nonaka, Juan J Ortiz, Jaakko Paasonen, Lore M Peeters, Mickaël Pereira, Pablo D Perez, Marjory Pompilus, Malcolm Prior, Rustam Rakhmatullin, Henning M Reimann, Jonathan Reinwald, Rodrigo Triana de Rio, Alejandro Rivera-Olvera, Daniel Ruiz-Pérez, Gabriele Russo, Tobias J Rutten, Rie Ryoke, Markus Sack, Piergiorgio Salvan, Basavaraju G Sanganahalli, Aileen Schroeter, Bhedita J Seewoo, Erwan Selingue, Aline Seuwen, Bowen Shi, Nikoloz Sirmpilatze, Joanna AB Smith, Corrie Smith, Filip Sobczak, Petteri J Stenroos, Milou Straathof, Sandra Strobelt, Akira Sumiyoshi, Kengo Takahashi, Maria E Torres-García, Raul Tudela, Monica van den Berg, Kajo van der Marel, Aran TB van Hout, Roberta Vertullo, Benjamin Vidal, Roel M Vrooman, Victora X Wang, Isabel Wank, David JG Watson, Ting Yin, Yongzhi Zhang, Stefan Zurbruegg, Sophie Achard, Sarael Alcauter, Dorothee P Auer, Emmanuel L Barbier, Jürgen Baudewig, Christian F Beckmann, Nicolau Beckmann, Guillaume JPC Becq, Erwin LA Blezer, Radu Bolbos, Susann Boretius, Sandrine Bouvard, Eike Budinger, Joseph D Buxbaum, Diana Cash, Victoria Chapman, Kai-Hsiang Chuang, Luisa Ciobanu, Bram Coolen, Jeffrey W Dalley, Marc Dhenain, Rick M Dijkhuizen, Oscar Esteban, Cornelius Faber, Marcelo Febo, Kirk W Feindel, Gianluigi Forloni, Jérémie Fouquet, Eduardo A Garza-Villarreal, Natalia Gass, Jeffrey C Glennon, Alessandro Gozzi, Olli Gröhn, Andrew Harkin, Arend Heerschap, Xavier Helluy, Kristina Herfert, Arnd Heuser, Judith R Homberg, Danielle J Houwing, Fahmeed Hyder, Giovanna Diletta Ielacqua, Ileana O Jelescu, Heidi Johansen-Berg, Gen Kaneko, Ryuta Kawashima, Shella D Keilholz, Georgios A Keliris, Clare Kelly, Christian Kerskens, Jibran Y Khokhar, Peter C Kind, Jean-Baptiste Langlois, Jason P Lerch, Monica A López-Hidalgo, Denise Manahan-Vaughan, Fabien Marchand, Rogier B Mars, Gerardo Marsella, Edoardo Micotti, Emma Muñoz-Moreno, Jamie Near, Thoralf Niendorf, Willem M Otte, Patricia Pais, Wen-Ju Pan, Roberto A Prado-Alcalá, Gina L Quirarte, Jennifer Rodger, Tim Rosenow, Cassandra Sampaio Baptista, Alexander Sartorius, Stephen J Sawiak, Tom WJ Scheenen, Noam Shemesh, Yen-Yu Ian Shih, Amir Shmuel, Guadalupe Soria, Ron Stoop, Garth J Thompson, Sally M Till, Nick Todd, Annemie Van Der Linden, Annette van der Toorn, Geralda AF van Tilborg, Christian Vanhove, Andor Veltien, Marleen Verhoye, Lydia Wachsmuth, Wolfgang Weber-Fahr, Patricia Wenk, Xin Yu, Valerio Zerbi, Nanyin Zhang, Baogui B Zhang, Luc Zimmer, Gabriel A Devenyi, M Mallar Chakravarty, Andreas Hess
bioRxiv 2022.04.27.489658; doi: https://doi.org/10.1101/2022.04.27.489658
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