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Space-time resolved inference-based whole-brain neurophysiological mechanism imaging: application to resting-state alpha rhythm

View ORCID ProfileYun Zhao, View ORCID ProfileMario Boley, Andria Pelentritou, Philippa J. Karoly, Dean R. Freestone, Yueyang Liu, View ORCID ProfileSuresh Muthukumaraswamy, William Woods, David Liley, View ORCID ProfileLevin Kuhlmann
doi: https://doi.org/10.1101/2022.05.03.490402
Yun Zhao
1Department of Data Science and AI, Faculty of IT, Monash University, Clayton, Victoria, Australia
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Mario Boley
1Department of Data Science and AI, Faculty of IT, Monash University, Clayton, Victoria, Australia
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Andria Pelentritou
2Swinburne University of Technology, Hawthorn, Australia
3Laboratoire de Recherche en Neuroimagerie (LREN), University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne, Switzerland
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Philippa J. Karoly
4Department of Biomedical Engineering, The University of Melbourne, Parkville, Australia
5Department of Medicine-St Vincent’s Hospital, The University of Melbourne, Parkville, Australia
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Dean R. Freestone
5Department of Medicine-St Vincent’s Hospital, The University of Melbourne, Parkville, Australia
6Seer Medical Pty Ltd, Melbourne, Australia
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Yueyang Liu
1Department of Data Science and AI, Faculty of IT, Monash University, Clayton, Victoria, Australia
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Suresh Muthukumaraswamy
7School of Pharmacy, University of Auckland, New Zealand
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William Woods
8School of Health Sciences, Swinburne University of Technology, Hawthorn, Australia
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David Liley
2Swinburne University of Technology, Hawthorn, Australia
5Department of Medicine-St Vincent’s Hospital, The University of Melbourne, Parkville, Australia
8School of Health Sciences, Swinburne University of Technology, Hawthorn, Australia
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Levin Kuhlmann
1Department of Data Science and AI, Faculty of IT, Monash University, Clayton, Victoria, Australia
5Department of Medicine-St Vincent’s Hospital, The University of Melbourne, Parkville, Australia
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  • ORCID record for Levin Kuhlmann
  • For correspondence: levin.kuhlmann@monash.edu
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Abstract

Neural mechanisms are complex and difficult to image. This paper presents a new space-time resolved whole-brain imaging framework, called Neurophysiological Mechanism Imaging (NMI), that identifies neurophysiological mechanisms within cerebral cortex at the macroscopic scale. By fitting neural mass models to electromagnetic source imaging data using a novel nonlinear inference method, population averaged membrane potentials and synaptic connection strengths are efficiently and accurately imaged across the whole brain at a resolution afforded by source imaging. The efficiency of the framework enables return of the augmented source imaging results overnight using high performance computing. This suggests it can be used as a practical and novel imaging tool. To demonstrate the framework, it has been applied to resting-state magnetoencephalographic source estimates. The results suggest that endogenous inputs to cingulate, occipital, and inferior frontal cortex are essential modulators of resting-state alpha power. Moreover, endogenous input and inhibitory and excitatory neural populations play varied roles in mediating alpha power in different resting-state sub-networks. The framework can be applied to arbitrary neural mass models and has broad applicability to image neural mechanisms in different brain states.

Highlights

  • The whole-brain imaging framework can disclose the neurophysiological substrates of complicated brain functions in a spatiotemporal manner.

  • Developed a semi-analytical Kalman filter to estimate neurophysiological variables in the nonlinear neural mass model efficiently and accurately from large-scale electromagnetic time-series.

  • The semi-analytical Kalman filter is 7.5 times faster and 5% more accurate in estimating model parameters than the unscented Kalman filter.

  • Provided several group-level statistical observations based on neurophysiological variables and visualised them in a whole-brain manner to show different perspectives of neurophysiological mechanisms.

  • Applied the framework to study resting-state alpha oscillation and found novel relationships between local neurophysiological variables in specific brain regions and alpha power.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted May 04, 2022.
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Space-time resolved inference-based whole-brain neurophysiological mechanism imaging: application to resting-state alpha rhythm
Yun Zhao, Mario Boley, Andria Pelentritou, Philippa J. Karoly, Dean R. Freestone, Yueyang Liu, Suresh Muthukumaraswamy, William Woods, David Liley, Levin Kuhlmann
bioRxiv 2022.05.03.490402; doi: https://doi.org/10.1101/2022.05.03.490402
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Space-time resolved inference-based whole-brain neurophysiological mechanism imaging: application to resting-state alpha rhythm
Yun Zhao, Mario Boley, Andria Pelentritou, Philippa J. Karoly, Dean R. Freestone, Yueyang Liu, Suresh Muthukumaraswamy, William Woods, David Liley, Levin Kuhlmann
bioRxiv 2022.05.03.490402; doi: https://doi.org/10.1101/2022.05.03.490402

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